Gene Information

Name : pRALTA_0240 (pRALTA_0240)
Accession : YP_001796120.1
Strain :
Genome accession: NC_010529
Putative virulence/resistance : Virulence
Product : type I secretion system ATP-binding component
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG2274
EC number : 3.6.3.43
Position : 207689 - 209821 bp
Length : 2133 bp
Strand : -
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 7830567; Product type e : enzyme

DNA sequence :
ATGGGTTCGAACGAAAACCTGGCGCGTCTCGACGATGCCGGCTTGGCTGCGCTCGTGCTCATCGCACGATTTCATGGCAT
TGCTACGGATGCCGCGCAAATCCGCCATGCCGCCGCGCTCGGTGGCGAGTCCTTCTCTGAGGCCGATCTGGTATTAGCCG
CTCGTGGCATGGGCCTGAAAGCCCGAGCAGTGGCGCTGGTGGCAGATCGGCTTGGCAAGACCCCATTCCCGGCCTTGGTG
CTGGACAGTGCGGGCCGGCATTTCATTCTCGCCGGTTCCGATGGCAAGACCGCGCTGATACTGGAGCCCGGCATGTCGGC
GCCCGCACCCAAGCCGATCGAAGAGATAGTGGCGCGTACGAGCGGGCGCATCCTGCTTTTCACCTCGCGCGCCTCCCTGG
CAGGCGAGCTGGCTCGCTTCGATTTCTCATGGTTTATCCCGGCGGTGGTCAAGTACCGCCGCCTGCTGCTGGAAGTGCTC
GGCGTTTCGATGGCGCTGCAACTGTTCGGGCTGGTGTCGCCACTGATGTTCCAGGTGGTGATGGACAAGGTGCTGGTGAA
CCGCACCTATAGCACCCTCAACGTGGTGTGCCTGGCGCTCCTTGTCAGCTCGGTATTTGAGGTGTTGCTCACGGGCCTGC
GCAACCATGTATTCGCGCACACGACCAACCGTATCGACGTGGAACTGGGCGCGCGCCTGTTTCGCCATCTTGTAGCCTTG
CCACTCGCCTATTTCGGCGCGCGGCGTGTGGGCGACACCGTGGCACGCGTGCGGGAGTTGGAAAGCATTCGAAATTTCCT
GACCGGCCAGGCGCTGACCGCGCTCATCGATCTGGTGTTCTCTGTGGTGTTCCTCGCTGTCATGTGCCTGTACAGCGTCT
GGCTCACGCTGATGGTGGTTCTGTCCTTGCCGCTCTACGGTGCGATTTCCGCCTTCATTACGCCGTTGCTGCGCAAGCGC
CTGAACGACAAGTTCGCCCGTGGCGCGGATAACCAATCGTTCCTCGTGGAATCGGTGTCCGGGATCGAAACGGTCAAGGC
CATGGCCGTGGAGCCGCAGTTCGTCAAACGCTGGGAAACCCAGCTCGCGGCATACGTCGCGGCGGGCTTCCGTGTGACCT
CACTCGGCAACGTCGGGCAGCAGGCGATTCAATTGGTGGGGAAGCTGGTGACGCTCGGCACGCTGTTTTTTGGAGCCAAG
CTCGTCATCGACGGCAAGCTGACCGTGGGCGCGCTGATCGCCTTCAACATGATGTCGCAGCGCGTGAGCGCCCCGGTGCT
GCGCCTCGCGCAACTGTGGCAGGATTTTCAGCAAGTCGGTATATCCATGAGCCGCCTCGGCGACATCTTGAATACGCGCA
CGGAGCTGGCGCAAAGCCGGCAAACGCCGCCGTCCATCAAGGGCAGCATCGTGTTCGAGAACATCCGCTTCCGCTATCGC
GCGGACGGCCCGCCGATCCTCGATGGCGTGAGCCTGGGGATCACCACCGGCCACGTCGTGGGTATTGTCGGGCGCTCGGG
CTCAGGCAAGAGCACGCTCACCAAACTGCTACAGCGACTCTATCTGCCGGAGCAGGGCGCGGTGCGTATAGATGGCATCG
ACCTCGCGCTGGCCGATCCCTCCTGGCTGCGCCGCCAGATCGGCGTGGTGTTGCAGGAGAACCTGCTGTTCAATCGCTCG
ATCCGCGACAACATTTCGCTCACCGATCCCGGCGCCCCGCTGGAGGCAGTCATGCAAGCGGCGAAGCTGGCGGGAGCGCA
CGATTTTATCTGCGACATGCCGGAAGGGTACGACACGGTGGTCGGTGAACACGGCGGCAACCTTTCGGGCGGCCAGCGGC
AGCGCCTGGCGATTGCACGGGCGCTGCTGACCAATCCGCGCGTGCTGGTGTTCGACGAAGCCACCAGTGCGCTCGATTTC
GAGACCGAGCGAATTATCCAAAACAATATGAAGGCCATCTGCGCCGGACGCACGGTGATCATCATCGCCCACCGGCTCAC
CGCCGTGCGCCACGCCGACCAGATCATTGCCATGGACGGCGGCCGTATCGTGGAACGGGGCAGGCATGAGGAGTTGCTGG
CACTGGGTGGCTACTATGCCCATCTCGTCTCGTTACAGGACAGCGGACTATGA

Protein sequence :
MGSNENLARLDDAGLAALVLIARFHGIATDAAQIRHAAALGGESFSEADLVLAARGMGLKARAVALVADRLGKTPFPALV
LDSAGRHFILAGSDGKTALILEPGMSAPAPKPIEEIVARTSGRILLFTSRASLAGELARFDFSWFIPAVVKYRRLLLEVL
GVSMALQLFGLVSPLMFQVVMDKVLVNRTYSTLNVVCLALLVSSVFEVLLTGLRNHVFAHTTNRIDVELGARLFRHLVAL
PLAYFGARRVGDTVARVRELESIRNFLTGQALTALIDLVFSVVFLAVMCLYSVWLTLMVVLSLPLYGAISAFITPLLRKR
LNDKFARGADNQSFLVESVSGIETVKAMAVEPQFVKRWETQLAAYVAAGFRVTSLGNVGQQAIQLVGKLVTLGTLFFGAK
LVIDGKLTVGALIAFNMMSQRVSAPVLRLAQLWQDFQQVGISMSRLGDILNTRTELAQSRQTPPSIKGSIVFENIRFRYR
ADGPPILDGVSLGITTGHVVGIVGRSGSGKSTLTKLLQRLYLPEQGAVRIDGIDLALADPSWLRRQIGVVLQENLLFNRS
IRDNISLTDPGAPLEAVMQAAKLAGAHDFICDMPEGYDTVVGEHGGNLSGGQRQRLAIARALLTNPRVLVFDEATSALDF
ETERIIQNNMKAICAGRTVIIIAHRLTAVRHADQIIAMDGGRIVERGRHEELLALGGYYAHLVSLQDSGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hlyB NP_755448.1 hemolysin B Virulence PAI I CFT073 Protein 0.0 59
hlyB CAD33760.1 hemolysin B Virulence PAI I 536 Protein 0.0 59
hlyB CAD42038.1 HlyB protein Virulence PAI II 536 Protein 0.0 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pRALTA_0240 YP_001796120.1 type I secretion system ATP-binding component VFG1557 Protein 0.0 59
pRALTA_0240 YP_001796120.1 type I secretion system ATP-binding component VFG1501 Protein 0.0 59
pRALTA_0240 YP_001796120.1 type I secretion system ATP-binding component VFG0907 Protein 0.0 59
pRALTA_0240 YP_001796120.1 type I secretion system ATP-binding component VFG0841 Protein 0.0 58
pRALTA_0240 YP_001796120.1 type I secretion system ATP-binding component VFG1269 Protein 0.0 57