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Name : Pnec_1378 (Pnec_1378) Accession : YP_001798098.1 Strain : Polynucleobacter necessarius STIR1 Genome accession: NC_010531 Putative virulence/resistance : Unknown Product : cytochrome c-type biogenesis protein CcmF Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 1186845 - 1188764 bp Length : 1920 bp Strand : - Note : TIGRFAM: cytochrome c-type biogenesis protein CcmF; PFAM: cytochrome c assembly protein; KEGG: pnu:Pnuc_1513 cytochrome c-type biogenesis protein CcmF DNA sequence : ATGATTCCTGAGTTTGGGCATTACGCATTGGTGCTGGCACTTTGTATTGCTAGTATTCAAGGGGTTTTGCCTTTGCTAGG CGCGCACTTTGGGCGCCGTGATTGGTTGGCGTTAGCTAGGTCCAGTGCGCAAACAGTTTTCTTATTGTTGGCGATTGCTT TCGGTATCTTGGCTTGGAGTTTTTATGTCAATGATTTTTCTGTGCTCTATGTTGCTGAGCACTCCAATTCGCAGTTGCCA GTTATCTATCGATTAGGTGCGGTATGGGGTGGTCATGAAGGCTCGCTCTTATTGTGGATCTTCTTGCTTGCTACCTGGAC TATCTTGGTGGCACAACTTTCAAAAGCCTTAGATGACTTCATGGTGGCACGCGTTATTGGTGTATTGGGGTTGGTTACCA GTGGTTTATTGCTATTTGTATTAACAACCTCAAATCCGTTTGAGCGTTTATTGCCTGCTGCACAAGATGGTCGATCTCTG AATCCACTTTTGCAAGACCCTGGCTTGGTATTTCATCCGCCAATGCTTTACATGGGTTATGTCGGCTTTTCTGTGGCCTT TGCTTTTGCCATTGCATCATTACTATCAGGCAGACTTGATGCTGCATGGGCGCGCTGGTCACGCCCTTGGACTACCGCTG CTTGGGTGTTCCTTACGCTCGGTATCGCCCTTGGTTCGTGGTGGGCTTATTACGAATTGGGTTGGGGTGGTTGGTGGTTT TGGGATCCTGTAGAAAATGCCTCATTTATTCCTTGGCTCGTAGGTACAGCATTACTGCATTCATTAGCCGTTACTGAAAA GCGTGGTGGCTTTAAGAGTTGGACCGTACTCCTAGCGATTACTGCATTCTCTTTATCGCTGCTCGGAACTTTCTTGGTTC GCTCAGACGTATTAACCTCGGTACATGCATTTGCAACTGATCCAAAGCGCGGTATTTTTATTCTGATCCTCTTATCTTTG GTGGTTGGTTCCTCACTATTACTTTATGCTTGGCGTGCGCCAAAAAGTACGATGGGTGGAAAATTTAGCCTGAGCTCTAG GGAAATATTTATCTTACTTGGAAATATTTTTCTGGTGGTTTCTGCCGGATCTGTTTTATTGGGTACGCTATATCCATTGC TGATCGATGCCTTGCATCTCGGCAAGATTTCAGTGGGCCCCCCCTATTTCAATAGCGTATTTGTTCCCATCATGGTTCCT TTGCTGACATTAATGGGTATTGGCCCTTGGGCTAGTTGGAAGCAGAGTAATTTGCTCGCCATCATCAAGCGTTTATGGCT AGCAGCTGCAGTGGCAGTGGTTGCAGGCATTGCGATACCTCTGATCATGGGTCAATTTACGTGGCTTGCAGGTATGGGCT TTATGTTGGCTTTTTGGATCATTGCATCAGGTTGTATGCAAATCATTCGTCAAGCTAAAGCAGGTAAGCCAACGCGATCT TTCATTGGTATGCAGGTGGCGCATTTAGGTATCGCAGTATTTGTTATTGGCGTGACAATGGTTGGCGCTTACCAAGAAGA AAAGGATGTACGCATGTCTGCTGGCGATACAGTCACGGTTGGCGGATATCAAATACAGCTTCAAAGTGTGAATGCGGAAC GTGGCCCAAATTACCAAGCAATGCGCGGGACATTCTTTCTATCTAGGGATGGCAGCCCTCAGATCAGTCTCTATCCCGAG AAAAGAAGTTATTTCTCGTCGACTATGCCAATGACTGAGGCTGCGATTGATGCAGGACTTACGCGGGATATATATGTGTC GCTGGGCGAAGAGTTAGGCGATCAGTCATGGGTCGTACGTGTGTACTACAAGCCTTTTGTAGATTGGATTTGGGGCGGTT GCTTGTTAATGGCCTTGGGCGGTGTATTGGCGATGTCTGATAAGCGTTATCGATTTAAGCTAAAGATTAAGTTCGCATGA Protein sequence : MIPEFGHYALVLALCIASIQGVLPLLGAHFGRRDWLALARSSAQTVFLLLAIAFGILAWSFYVNDFSVLYVAEHSNSQLP VIYRLGAVWGGHEGSLLLWIFLLATWTILVAQLSKALDDFMVARVIGVLGLVTSGLLLFVLTTSNPFERLLPAAQDGRSL NPLLQDPGLVFHPPMLYMGYVGFSVAFAFAIASLLSGRLDAAWARWSRPWTTAAWVFLTLGIALGSWWAYYELGWGGWWF WDPVENASFIPWLVGTALLHSLAVTEKRGGFKSWTVLLAITAFSLSLLGTFLVRSDVLTSVHAFATDPKRGIFILILLSL VVGSSLLLYAWRAPKSTMGGKFSLSSREIFILLGNIFLVVSAGSVLLGTLYPLLIDALHLGKISVGPPYFNSVFVPIMVP LLTLMGIGPWASWKQSNLLAIIKRLWLAAAVAVVAGIAIPLIMGQFTWLAGMGFMLAFWIIASGCMQIIRQAKAGKPTRS FIGMQVAHLGIAVFVIGVTMVGAYQEEKDVRMSAGDTVTVGGYQIQLQSVNAERGPNYQAMRGTFFLSRDGSPQISLYPE KRSYFSSTMPMTEAAIDAGLTRDIYVSLGEELGDQSWVVRVYYKPFVDWIWGGCLLMALGGVLAMSDKRYRFKLKIKFA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 5e-163 | 63 |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 2e-121 | 55 |
