Gene Information

Name : Pnec_1381 (Pnec_1381)
Accession : YP_001798101.1
Strain : Polynucleobacter necessarius STIR1
Genome accession: NC_010531
Putative virulence/resistance : Virulence
Product : heme exporter protein CcmC
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0755
EC number : -
Position : 1189380 - 1190150 bp
Length : 771 bp
Strand : -
Note : TIGRFAM: heme exporter protein CcmC; PFAM: cytochrome c assembly protein; KEGG: pnu:Pnuc_1516 heme exporter protein CcmC

DNA sequence :
ATGAATCAGGTAAATCATTTTTCTAGCCACCGCTTAATTAATTGGTTTAAGTTATCTAGCCCCAGCACCTTTTATCCGGT
GGCGGGTAAGCTCATCCCTTTCTTTTGGGTGTTGACATTTCTATTTGGTGCTGCTGGTTTGTGGATCAGTTTTTTTGTTG
CGCCAGTTGATGCCGTTCAGGGGCAGGGATATCGCATTATTTTTATTCATGTGCCCGCTTCATGGATATCGATGTTCATC
TATTTGGTGATGGCTGCATGGGCAGGGCTCGGATTAGTCTTTAATACGCGCTTGTCTGCCATGATGGCGCAAGCTCTTGC
TCCAATAGGTGCTTGGATGGCGTTTCTGTCTTTGTGGTCCGGAGCTTTTTGGGGCAAGCCAATGTGGGGTGCGTGGTGGG
TGTGGGATGCACGCCTTACTTCAGAGTTGATCCTCTTGTTTCTCTACTTAGGCTTTATTGCCTTGCGAGCCTCTATTGAT
GATCCACGTCGGGCCGATAAGGCTAGCGCCATTTTGGCTTTGGTAGGTGTAGTCAATGTGCCTATTATTTATTTTTCAGT
GAAATGGTGGAATACCTTGCATCAAGGGGCATCAGTTTCCTTGACTAAAGCGCCGGCGATGGCCCAAACCATGCTTTTGG
GTATGCTTTTAATGGCTCTGTGCTTTTGGATGTACACCATTGCTGTTGCCTTAATGCGAGTGAGGGCAATCATATTGGAG
CGTGAAGCCCATGCGGATTGGGTGAGACAATCTATTGAGGTGAAAAGCTGA

Protein sequence :
MNQVNHFSSHRLINWFKLSSPSTFYPVAGKLIPFFWVLTFLFGAAGLWISFFVAPVDAVQGQGYRIIFIHVPASWISMFI
YLVMAAWAGLGLVFNTRLSAMMAQALAPIGAWMAFLSLWSGAFWGKPMWGAWWVWDARLTSELILLFLYLGFIALRASID
DPRRADKASAILALVGVVNVPIIYFSVKWWNTLHQGASVSLTKAPAMAQTMLLGMLLMALCFWMYTIAVALMRVRAIILE
REAHADWVRQSIEVKS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ccmC AAN62109.1 putative heme exporter protein C Not tested PAGI-2(C) Protein 5e-74 69

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pnec_1381 YP_001798101.1 heme exporter protein CcmC VFG1856 Protein 3e-36 46