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Name : Pnec_1508 (Pnec_1508) Accession : YP_001798210.1 Strain : Polynucleobacter necessarius STIR1 Genome accession: NC_010531 Putative virulence/resistance : Unknown Product : protein-export membrane protein SecD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 1311576 - 1313435 bp Length : 1860 bp Strand : + Note : TIGRFAM: protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecD; PFAM: SecD/SecF/SecDF export membrane protein; KEGG: pnu:Pnuc_1791 protein-export membrane protein SecD DNA sequence : ATGAATCGCTACCCTCTCTGGAAATATCTAGTCATCGCCGTTGCATTACTGATCGGCGGACTATATTCATTACCCAATTT CTATGGTGAGGCCCCAGCGGTTCAAGTCTCGTCTACCAAACCAACCATCAAGGTTGATTTTGCAACACAGTCTCGTGTAG AAAAAATTCTGACTGAAGCCAACATTAATAACACCGGTGTTTTCTTTGAAGTTGCCGGCAATGTGGGCTCCATCAAAGTT CGTTTTGACAATACTGACATTCAATTACGTGCACGCGACCTCTTGCAACAGAAATTAAATGTTGATCAAAATGATCCGAA TTACACCGTTGCACTGAACTTACTCTCTAATACCCCGGGATGGCTCAATGCAATGAATGCTTTGCCAATGCCCTTAGGTC TCGACTTGCGTGGTGGCGTGTACTTCCTCCTCCAGGTAGATATGAAGGGTGCGGTGCAGAAGAAGGTCACTTCTCTAGCT ACGGACATTCGTGGTCAGTTGCGCGACAAAAATATTCGTCACCAGGGTATTGAGCGTGGTGCCGATTTCATTTCCATCAA CTTTGGTAGCACCGCTGATGCAGAGGCAACTCGCTCTGTACTAATGACAGCGCAACCAGAATTGATTTGGCAGGTAAAGC CTACTGGTCTATCTCCAAAAGTGGTTGGCGAATTTAAGTCGACAGCTTTAAAAGAAATTCATGATAATGCGGTAAAGCAA AACATCATCACCCTGAATAAACGTGTGAATGAGTTAGCGGTTAAAGAACCAGTCATTCAACAACAGGGCGCCGAGCGCAT TGTGGTTCAACTACCAGGCGTTCAAGATACCGCTCGTGCCAAAGATATTATTGGTCGTACGGCTACACTCGAATCACGCC TTGCTGATCCACTTGTTACCACCATCGCCATCGGCGAAACTCCGCCGCCAGGCATGGATACCTTCCGTTTTGGTGAAAAC CGTTTAGGGGTATTTAAAAAATCAGTAATCTTCAGTGGTGACCGCATTACCGATGCAAGCGCTGGTTTTGATCAAAACCA GCGCCCTTCTGTAAACATCTCTTTAGATGCAGCTGGTGGCCGCGTCATGCAAGAAGTCACCCGTGAAAATATCGGGAAGC CGATGGGCATGATCTTGTTTGAAAAAGGTAAGGGTGAGGTACTCACTATTGCCACATTCCAAAGCGAATTTAGCTCCAAG TTCCAAATCACTGGTCAACCGACTACTGAAAGCGCAAATGACTTAGCTCTTCTGTTGCGTGCGGGCTCATTAGCAGCGCC AATGGAAATCATTGAAGAGCGCACTATCGGACCAAGCCTAGGCGCTGAAAACATTGAAAAAGGTTTTAAGTCCCTCTTAA TTGGCTTTGCTGCTATCGCAATTTCCATGATGGCGTACTACCTCTTGTTTGGAGCTTTCTCTGTAGTGGCGCTTGCAGTA AATCTGCTCTTACTCATCTCTGTGCTATCTATGTTGCAAGCCACTCTCACGTTGCCAGGTATTGCTGCAATGGCCTTGGC GCTAGGTATGGCGATTGACTCGAACGTATTGATTAATGAACGCATTCGCGAAGAGTTACGCAATAGCGCCTCTCCTCAAG CAGCTATCGCCGTAGGTTTTGACAAAGCCTGGGCAACGATTTTGGACTCCAACGTAACTACATTGATTGCTGGTTTAGCG TTGCTGGCCTTCGGTTCAGGCCCTATTAAAGGTTTTGCGGTGGTTCACTGCCTAGGTATTCTGACTTCAATGTTCTCCGC AGTCTTTTTCTCACGCGGTCTTGTCAATCTCTGGTACGGCAGACATAAGAAGATCCAAAAACTCACTATCGGCCAAGTTT GGCGCCCACAGGAGAAATAA Protein sequence : MNRYPLWKYLVIAVALLIGGLYSLPNFYGEAPAVQVSSTKPTIKVDFATQSRVEKILTEANINNTGVFFEVAGNVGSIKV RFDNTDIQLRARDLLQQKLNVDQNDPNYTVALNLLSNTPGWLNAMNALPMPLGLDLRGGVYFLLQVDMKGAVQKKVTSLA TDIRGQLRDKNIRHQGIERGADFISINFGSTADAEATRSVLMTAQPELIWQVKPTGLSPKVVGEFKSTALKEIHDNAVKQ NIITLNKRVNELAVKEPVIQQQGAERIVVQLPGVQDTARAKDIIGRTATLESRLADPLVTTIAIGETPPPGMDTFRFGEN RLGVFKKSVIFSGDRITDASAGFDQNQRPSVNISLDAAGGRVMQEVTRENIGKPMGMILFEKGKGEVLTIATFQSEFSSK FQITGQPTTESANDLALLLRAGSLAAPMEIIEERTIGPSLGAENIEKGFKSLLIGFAAIAISMMAYYLLFGAFSVVALAV NLLLLISVLSMLQATLTLPGIAAMALALGMAIDSNVLINERIREELRNSASPQAAIAVGFDKAWATILDSNVTTLIAGLA LLAFGSGPIKGFAVVHCLGILTSMFSAVFFSRGLVNLWYGRHKKIQKLTIGQVWRPQEK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 1e-90 | 42 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 4e-91 | 42 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 4e-91 | 42 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 4e-91 | 42 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 4e-91 | 42 |
