Gene Information

Name : Pnec_R0002 (Pnec_R0002)
Accession : -
Strain : Polynucleobacter necessarius STIR1
Genome accession: NC_010531
Putative virulence/resistance : Unknown
Product : 16S ribosomal RNA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 33960 - 35486 bp
Length : 1527 bp
Strand : +
Note : -

DNA sequence :
AGAGTTTGATCCTGGCTCAGATTGAACGCTGGCGGCATGCCTTACACATGCAAGTCGAACGGCAGCACGGGTGCTTGCAC
CTGGTGGCGAGTGGCGAACGGGTGAGTAATACATCGGAACGTACCTTATCGTGGGGGATAACGCAGCGAAAGCTGTGCTA
ATACCGCATACGCCCTGAGGGGGGAAAGCGGGGGATCGAAAGACCTCGCGCGATTAGAGCGGCCGATGCCTGATTAGCTT
GTTGGTGGGGTAAAAGCCCACCAAGGCGACGATCAGTAGCTGGTCTGAGAGGACGATCAGCCACACTGGGACTGAGACAC
GGCCCAGACTCCTACGGGAGGCAGCAGTGAGGAATTTTGGACAATGGGGGCAACCCTGATCCAGCAATGCCGCGTGAGTG
AAGAAGGCCTTTGGGTTGTAAAGCTCTTTTGTCAGGGAAGAAACACCGGCTCTAACACAGTCCGGGAATGACGGTACCTG
AAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCGAGCGTTAATCGGAATTACTGGGCGT
AAAGCGTGCGCAGGCGGTTATACAAGATAGGCGTGAAATCCCCGGGCTTAACCTGGGAATGGCGCCTGTGACTGTATGGC
TAGAGTGTGTCAGAGGGGGGTAGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAATACCAATGGCGAAGG
CAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCC
CTAAACGATGCTGACTAGTTGTTCGGGATTTACATCCTGAGTAACGTAGCTAACGCGTGAAGTCAGCCGCCTGGGGAGTA
CGGTCGCAAGATTAAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGATGATGTGGATTAATTCGATGCAACGC
GAAAAACCTTACCTACCCTTGACATGTCACTAACGAAGTAGAGATACATTAGGTGCTCGTAGGAGAAAGTGAACACAGGT
GCTGCATGGCTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTGTCTTTAGTTGCT
ACGCAAGAGCACTCTAAAGAGACTGCCGGTGACAAACCGGAGGAAGGTGGGGATGACGTCAAGTCCTCATGGCCCTTATG
GGTAGGGCTTCACACGTCATACAATGGTGCATACAGAGGGTTGCCAACCCGCGAGGGGGAGCTAATCTCAGAAAATGCAT
CGTAGTCCGAATCGTAGTCTGCAACTCGACTACGTGAAGCTGGAATCGCTAGTAATCGCGGATCAGAATGTCGCGGTGAA
TACGTTCCCGGGTCTTGTACACACCGCCCGTCATACCATGGGAGTGGGTTTTGCCAGAAGCTGTTAGCCTAACCGCAAGG
GGGGCGACTGCCACGGCAGGGTTCATGACTGGGGTAAAGTCGTAACAAGGTAGCCGTATCGGAAGGTGCGGCTGGATCAC
CTCCTTT

Protein sequence :
-

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
FTM_1085 - 16S ribosomal RNA Not tested FPI DNA e-109 86.9
FTM_1695 - 16S ribosomal RNA Not tested FPI DNA e-109 86.9
FTW_2070 - 16S ribosomal RNA Not tested FPI DNA e-109 86.9
FTW_2069 - 16S ribosomal RNA Not tested FPI DNA 8e-90 86.2
FTT_r10 - 16S ribosomal RNA Not tested FPI DNA e-181 84.7
FTT_r07 - 16S ribosomal RNA Not tested FPI DNA e-181 84.7