Gene Information

Name : pykF1 (cce_3420)
Accession : YP_001804834.1
Strain :
Genome accession: NC_010546
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : -
Position : 3518320 - 3520098 bp
Length : 1779 bp
Strand : -
Note : catalyzes the formation of phosphoenolpyruvate from pyruvate

DNA sequence :
ATGTCCTTTAATTCTATAGCTCGCCGAACCAAAATCGTGGCAACCATCGGTCCTGCTACCCAAAATAAAGAAATTTTACG
TCAATTAATTTTAGCAGGGGCGACTACCCTACGACTTAATTTTTCTCATGGTGATCATGACTATCATAAACATAGTATTC
GTCTCATTCGTCAAACGGCTTATGAGTTAAATCAACCAGTTGCCATTTTACAAGATTTACAAGGACCCAAAATACGTCTA
GGTAAATTTGTCAATGGACCGATTACCCTAAAACCGGGTGATCCTTTTATTTTGACCAGTCGTGATGTCGAATGTAATCA
AACCATCAGTTCTATCAGCTATGAATACCTCTCTCAAGAAGTTCCTGAACAAGCCAGAATTTTAATGGATGATGGGAAAG
TCGAAATGCGGGTCGAACGGGTAGATAAAGAGAATAAAGACCTTCATTGTCAGGTTGTGGTGGGGGGGGTGTTGTCTGAT
AGTAAGGGGGTCAACTTTCCAGGGGTTTATTTATCCGTTAAAGCATTAACCAAAAAAGATAAAAAAGATTTGCTGTTTGG
TTTAGATCAAGGGGTCGACTGGATTGCTTTGAGTTTTGTGAGAAATCCTCAAGATATTCTTGAAATTAAAGAAATCATCG
CTAATGCAGGAAAAAATGTGCCTGTCATCGCCAAAATAGAAAAACATGAGGCGATCGAAGATATGGAAGAAATTCTTTCT
TTGTGTAACGGGGTTATGGTAGCACGGGGAGACTTAGGGGTAGAGTTACCCCCCGAAGATGTTCCCATTCTGCAAAAACG
GTTAATTGCGACGGCCAATAAATTAGGTATTCCTGTGATTACAGCGACCCAAATGTTGGATAGTATGGCCAATAATCCTC
GGCCTACCCGTGCGGAAGTTTCTGATGTGGCCAATGCTATCTTGGACGGAACCGATGCGGTGATGTTATCCAATGAAACC
GCCGTGGGTAAATATCCGGTGGAAGCGGTGGCCACCATGGCCACCATCGCTGAACGCATCGAAAAGGAACCCACGACCAC
TAAAATGATGTCTGAAGAGAAACAATCCATTCCTAATGCTATTTCTTCGGCGGTCAGTCATATTGCCCAAGAACTCAATG
CAGCGGCCATCATGTCTTTGACTAAAACTGGCTCAACAGCCCGAAATGTCTCAAAATTCCGTCCTCAAATTCCAATTTTA
GCGGTGACTCCCCATGTAGACGTGGCACGACAATTACAGTTAGTATGGGGGGTAAAACCTTTATTGGTGCTGGATTTAGC
CTCAGCCACTCAAACCTTCCAATCGGCGGTTAATGTCGCTCAAGAGAATCATTTACTCAAAGATGGAGATTTAGTGGTGA
TGACCGCCGGAACTCTACAAGGGGTAGCAGGCTCGACGGATTTGATTAAAGTAGAAATGGTCAAAGCTATCTTGGGAAAG
GGGGTCGGCGTTGGCCAGGGTTCGGCGAGTGGACGAGCTAGAATCGCCCATCATGCCAGAGAATTAGGTAATTTTGAACC
AGGGGATATTCTGGTGGTTCCAGGAACCAACGCCGAGTTTGTTGACATGATGCGTAAAGCTTCAGGTATTATTACCGAGG
AATCCAGTCTCACCAGTCATGCTGCTGTGATTGGGTTGCGTTTAGGGGTTCCCGTTATTGTGGGATTTAAAGAAGCAACC
CAAAAGATTCGAGAAGGGGCAATTATTACGGTGGATGCTCAAAAAGGGTTAGTGTATTCGGGTGTTGTGACCAGTAACAG
TCATTATGGTGCCATGTAA

Protein sequence :
MSFNSIARRTKIVATIGPATQNKEILRQLILAGATTLRLNFSHGDHDYHKHSIRLIRQTAYELNQPVAILQDLQGPKIRL
GKFVNGPITLKPGDPFILTSRDVECNQTISSISYEYLSQEVPEQARILMDDGKVEMRVERVDKENKDLHCQVVVGGVLSD
SKGVNFPGVYLSVKALTKKDKKDLLFGLDQGVDWIALSFVRNPQDILEIKEIIANAGKNVPVIAKIEKHEAIEDMEEILS
LCNGVMVARGDLGVELPPEDVPILQKRLIATANKLGIPVITATQMLDSMANNPRPTRAEVSDVANAILDGTDAVMLSNET
AVGKYPVEAVATMATIAERIEKEPTTTKMMSEEKQSIPNAISSAVSHIAQELNAAAIMSLTKTGSTARNVSKFRPQIPIL
AVTPHVDVARQLQLVWGVKPLLVLDLASATQTFQSAVNVAQENHLLKDGDLVVMTAGTLQGVAGSTDLIKVEMVKAILGK
GVGVGQGSASGRARIAHHARELGNFEPGDILVVPGTNAEFVDMMRKASGIITEESSLTSHAAVIGLRLGVPVIVGFKEAT
QKIREGAIITVDAQKGLVYSGVVTSNSHYGAM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 7e-74 44
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 7e-74 44
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 6e-74 44
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 1e-73 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pykF1 YP_001804834.1 pyruvate kinase VFG0479 Protein 3e-74 44