Gene Information

Name : BamMC406_3010 (BamMC406_3010)
Accession : YP_001809702.1
Strain :
Genome accession: NC_010551
Putative virulence/resistance : Virulence
Product : virulence protein SciE type
Function : -
COG functional category : R : General function prediction only
COG ID : COG4455
EC number : -
Position : 3333225 - 3334079 bp
Length : 855 bp
Strand : +
Note : PFAM: virulence protein SciE type; KEGG: bpm:BURPS1710b_A1623 SciE protein

DNA sequence :
ATGAACGCCCCTGATACCACCACGCCAGCCACTGGCCGCCCAGCAGTGCAGAACCTGCTGCAGACCCAGTCGCTCGACGC
GCTGAAAGAGCAAACCATCGAAGCGGTGCGTCAGCGGCCGTCCGACCCGTCCGAACGCTGGCTGCTGTTCCAGCTGCTGT
GCGTCGACGGCGACTGGGAACGCGCGCTCAAGCAGTTGCAGACCTGGGCAACATTGGAGCCCGAAGGCACTGCACGCGCG
CAGCTGCATCGCGGCCTCATCGAAGGCGAGATGTTCCGCACGGAGGTATTCGCCGGCACGCGCACTCCCGGCTTCGTCGA
CGAAGCCACGCCCGCGTGGATCGACCAGTTGCTGCAGGCGAATGTCCGGCTCGGCGCCGGCGACGTGGCGGGCGCCGACG
CGCTGCGCGAGGCCGCGCTCGACGCGGCGCCAGCCAGTCGAGGCGAAAGCGCCGAAATGGGTGACTTCGCATGGCTGACC
GACAGCGACACGCGACTCGGCCCCGTCTGCGAAATGGTCGTTGCAGGCGGTTACCGGTGGATTCCGTTCGCCCGCATCAA
GTCGCTCACGCTCACCCCGATCGGCACGCTGACCGATCTCGTATGGCGGCCTGCCACGCTGATCCTGCGCGATGCCACGG
TTCTCAGGGGGTACGTGCCGACCCGCTACCCGGGCTCGGAGCATGGTCCCGCCGCCGTCCGGCTCGCGCGCGAAACCCGC
TGGCAGGACATCGGCGAAACGAACGTGATCGCACTCGGACAAAAAACCTGGACGACCAACTGCGGCGACTGGGGCCTGCT
GGATATCGGCGGCTGCCGCTTCACCGATGAAGACGCAGATGGCACGTCATCCTGA

Protein sequence :
MNAPDTTTPATGRPAVQNLLQTQSLDALKEQTIEAVRQRPSDPSERWLLFQLLCVDGDWERALKQLQTWATLEPEGTARA
QLHRGLIEGEMFRTEVFAGTRTPGFVDEATPAWIDQLLQANVRLGAGDVAGADALREAALDAAPASRGESAEMGDFAWLT
DSDTRLGPVCEMVVAGGYRWIPFARIKSLTLTPIGTLTDLVWRPATLILRDATVLRGYVPTRYPGSEHGPAAVRLARETR
WQDIGETNVIALGQKTWTTNCGDWGLLDIGGCRFTDEDADGTSS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0291 NP_454873.1 hypothetical protein Not tested SPI-6 Protein 4e-40 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BamMC406_3010 YP_001809702.1 virulence protein SciE type VFG2072 Protein 1e-31 41