Gene Information

Name : BamMC406_3013 (BamMC406_3013)
Accession : YP_001809705.1
Strain :
Genome accession: NC_010551
Putative virulence/resistance : Virulence
Product : type VI secretion protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3520
EC number : -
Position : 3336470 - 3337531 bp
Length : 1062 bp
Strand : +
Note : TIGRFAM: type VI secretion protein, VC_A0111 family; PFAM: protein of unknown function DUF1305; KEGG: bte:BTH_II0135 putative cytoplasmic protein

DNA sequence : 
ATGGATACATTCGACTCGACGCCCGTCGACGACCGCTCGCCGCTGCACCCTGACTCGCTGCGCGTGTGGTTCGACGAGCG
CACGCCGTGGCAGGCGGGTTTCCTGAGCCTGCTGCGCACGATCAGCGCGCGCGATGCAACCCAGCCGCTGCCCGGCACGG
CACGCCTGCCGAGGCAGGAGCCTTTTCGCGTCGGCCAGCAACCGTCGATGGCGTTCGCGCCGCGCGAAGTCGCGGCGCTC
GACGTGCAGGGCGGCCGGCTGGACGTCCGGCTCTTCGGGCTCGGACTGTGGGGGCCGCAGGGCCCGCTGCCGCTTCACAT
GACGGAACTGGCGTATAGCCGTGCGGAGAGCCATCAGGACAAGACGCTCATTGCATTCGCCAATCTGTTTCATCACCGGG
CGCTCACGCTGTTCTACCGGGCGTGGGCATCCGCACAAGCGACCGTCTCGCTCGACCGGCCGTCGCAGGAGACGTTCTCG
TTCTATATCGGCAGCCTGATGGGCACCGATCCGGCCGAAGCCGCGTGTACGCACCCGCCTCCGCATGCGCGCTATGCGGC
CTCGGCGCACCTGGTGCGCGAGGCACGCAATCCGGACGGCCTGGCCGCGACGCTGTCCCATTACTTCGGCGTACCTGTGG
CCGTCGACGAATTCGTGTCGCACTGGATTCAGATCGCCGGCCCCGAGCGCTGCCTGCTCGGCGCGCCCGCACCGTCGACG
ATCATGGGCGAGGGTGCGCTGCTGGGTGACATGATCCCCGATTGCCAGCACAAGTTCCGTCTCGTGATCGGGCCGCTCGA
TCTCGACCAGTACCTGCGTCTGACACCGCATGGCGATGATCTGCCGACGCTGGTCGACTGGGTCCGCGCGTTCGTCGGTC
TCGAATATGACTGGGAAATCAAGCTGCTCGTCAAGCCGCGCGCCGCACCGCCCGCGCGCGCCGACAGCTCTCACCGGCTG
GGCTATTCGACCTGGCTCGGGGAATCCATGGACGACGAACCGGTCGTCGGCATGGTGTTCGAGCCCGAGAAATACTGCGA
TCAACTGGAGAACCCAGCATGA

Protein sequence : 
MDTFDSTPVDDRSPLHPDSLRVWFDERTPWQAGFLSLLRTISARDATQPLPGTARLPRQEPFRVGQQPSMAFAPREVAAL
DVQGGRLDVRLFGLGLWGPQGPLPLHMTELAYSRAESHQDKTLIAFANLFHHRALTLFYRAWASAQATVSLDRPSQETFS
FYIGSLMGTDPAEAACTHPPPHARYAASAHLVREARNPDGLAATLSHYFGVPVAVDEFVSHWIQIAGPERCLLGAPAPST
IMGEGALLGDMIPDCQHKFRLVIGPLDLDQYLRLTPHGDDLPTLVDWVRAFVGLEYDWEIKLLVKPRAAPPARADSSHRL
GYSTWLGESMDDEPVVGMVFEPEKYCDQLENPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0288 NP_454870.1 hypothetical protein Not tested SPI-6 Protein 6e-72 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BamMC406_3013 YP_001809705.1 type VI secretion protein VFG2075 Protein 5e-41 42