Gene Information

Name : BamMC406_0402 (BamMC406_0402)
Accession : YP_001807115.1
Strain :
Genome accession: NC_010551
Putative virulence/resistance : Virulence
Product : type VI secretion protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3516
EC number : -
Position : 450452 - 450967 bp
Length : 516 bp
Strand : +
Note : TIGRFAM: type VI secretion protein, VC_A0107 family; PFAM: conserved hypothetical protein; KEGG: bam:Bamb_0381 uncharacterised conserved protein UCP028301

DNA sequence :

ATGGCCAAGAAAGAAAGCATTCAGAAAAGCTTGCAGAAAATTCGGCCGCCGCGCGTCCAATTGACCTACGAGGTCGAGAA
GGGCGACGCGATCGAGGTGAAGGAACTGCCGTTCGTCGTCGGGGTCGTCGGCGATCTGGCGGGCCAGTCGGAAATCGAGC
AGCCGAAGCTGCGCGACCGCAAGTTCGTCAATATCGACCGCGACAACTTCGACGACGTGATGAAGGCGATCGAGCCGCGC
GCCGCGTTTCAGGTGGAAAACCGCCTGAGCCCGGAAGGCGGCAAGTTCGCGGTCGACCTGAAGTTCCGTTCGCTGTCGGA
TTTCAGCCCGGACGAAGTCGTCGAACAGGTCGAGCCGCTGCGCCGCCTGCTCGACGCGCGTTCGAAGCTCGCCGACCTGC
GCAACAAGCTCGCCGGCAACGACAAGCTCGAGGATCTGCTGTCGGAAGTGCTGAAGAACACGCAGCAGCTGCAGGAGCTC
GCGAAGGGCACGGGCGGCGACAAAGACGGCGAATGA

Protein sequence :

MAKKESIQKSLQKIRPPRVQLTYEVEKGDAIEVKELPFVVGVVGDLAGQSEIEQPKLRDRKFVNIDRDNFDDVMKAIEPR
AAFQVENRLSPEGGKFAVDLKFRSLSDFSPDEVVEQVEPLRRLLDARSKLADLRNKLAGNDKLEDLLSEVLKNTQQLQEL
AKGTGGDKDGE

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
STY0297	NP_454879.1	conserved hypothetical protein	Not tested	SPI-6	Protein	8e-28	43

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
BamMC406_0402	YP_001807115.1	type VI secretion protein	VFG2069	Protein	1e-27	43