Gene Information

Name : glcF (BamMC406_0648)
Accession : YP_001807361.1
Strain :
Genome accession: NC_010551
Putative virulence/resistance : Unknown
Product : glycolate oxidase iron-sulfur subunit
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG0247
EC number : -
Position : 729031 - 730257 bp
Length : 1227 bp
Strand : -
Note : PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: bam:Bamb_0622 glycolate oxidase iron-sulfur subunit

DNA sequence :
ATGCAAACGAACCTCGCCGATTTCATTCGCAACACGCCCGACGGCGACGAGGCCGACGCGATCCTGCGCAAGTGCGTGCA
TTGCGGCTTCTGCACCGCGACGTGCCCGACCTACCAGTTGCTCGGCGACGAACTCGACGGCCCGCGCGGGCGCATCTACC
TGATCAAGCAGATGGTCGAAGGCGCGCCTGTCACGCGCAGCACGCAGCAGCACCTCGATCGCTGCCTCACCTGCCGCAGC
TGCGAGACGACCTGCCCGTCGGGGGTCCAGTACGGCAGGCTCGTCGAGATCGGCCGCAAGCACGTCGAGGCGCAGGTGCG
GCGCCCGTTGCAGCAGCGAATCCTGCGCCGCGTGCTCGCGAGCCTGGTGCCGAACGCGGCGCTGTTCTCGCCGGTCATGC
GGCTCGGCCAGCACGTGCGGCCGCTGTTGCCGAAACGACTGCGCGACAAGGTACCGCCGCGCCAGCGGCTGCTCGAATGG
CCGCAGCGCACGCATCCGCGCAAGATGCTGATGCTCGGCGGCTGCGTGCAGCCGTCGATGCTGCCGAACATCAACATCGC
GACCGCGCGCGTGCTCGACGCACTCGGCGTCGAGACGATCGTCGCGCCCGACGCGGGCTGCTGCGGCGCGATCCGCCTGC
ACCTGAACTATCACGACGAAGCGCTCGCCGACGCACGCCGCAACATCGACGCGTGGTGGCCGTATATCGAGCAAGGTGCC
GAAGCGATCGTCATGAACGCATCGGGCTGCGGCGCGACGGTGCTCGAATATGCGCACCTGCTGCGTGACGATCCGGCCTA
TGCGGAAAGAGCGCAGCGCATCGTCGCGCTGACGCGCGACATCTCCGACGTGCTGCTCGCGTTCGAGGCCGAGATCGCGA
CGCTCGCGCGGCGCCGCGCGATCCATACCGTCGCGTACCACCCGCCGTGCACGCTGCAGCACGGCCAGCAGTCGCGCGGC
AAGGTGGAGCGCCTGCTCGAGACGCTCGGCATCGAGGTGCGGCTGCCGGCCGACAGCCATCTGTGCTGCGGATCGGCCGG
CACCTATTCGCTGACGCAGCCGTCGCTGTCGTACCGGCTGCGCAAGCAGAAGCTGCTGAAGCTGCAGGCACTCGAGCCGC
AGATGATCGTGTCCGGCAACGTCGGCTGCATCGCGCACCTGCAGAGCGGCACGCAGATTCCGGTCGCGCACTGGATCCAG
CTCGTCGAGCATCTGCTGTACGGCTAG

Protein sequence :
MQTNLADFIRNTPDGDEADAILRKCVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQMVEGAPVTRSTQQHLDRCLTCRS
CETTCPSGVQYGRLVEIGRKHVEAQVRRPLQQRILRRVLASLVPNAALFSPVMRLGQHVRPLLPKRLRDKVPPRQRLLEW
PQRTHPRKMLMLGGCVQPSMLPNINIATARVLDALGVETIVAPDAGCCGAIRLHLNYHDEALADARRNIDAWWPYIEQGA
EAIVMNASGCGATVLEYAHLLRDDPAYAERAQRIVALTRDISDVLLAFEAEIATLARRRAIHTVAYHPPCTLQHGQQSRG
KVERLLETLGIEVRLPADSHLCCGSAGTYSLTQPSLSYRLRKQKLLKLQALEPQMIVSGNVGCIAHLQSGTQIPVAHWIQ
LVEHLLYG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glcF CAE85243.1 GlcF protein Not tested PAI V 536 Protein 1e-103 54