Gene Information

Name : BamMC406_4934 (BamMC406_4934)
Accession : YP_001811597.1
Strain :
Genome accession: NC_010552
Putative virulence/resistance : Unknown
Product : LysR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0583
EC number : -
Position : 2081052 - 2081951 bp
Length : 900 bp
Strand : -
Note : PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_4415 transcriptional regulator, LysR family

DNA sequence :
ATGCGCATCCCGCCGCTCAAGGCCATCATCGCGTTCGAAAGTGTCGCCCGGACCAAAAGCGTCAATCGCGCGGCGGAAGA
GCTCGGCCTGACCGCGTCCGCCGTGAGCCACCAGCTCAGCAACCTCGAATCGCAGATCGGTCAGCCGTTGTTCCAGCGCT
CCGGGCGTGGCCTCGTCCTCACGCCGACCGGCGAGCGCTACCTGACGGACGTCACCGGGTCGCTCGCCGACTTGAGCCGC
GCAACCGAGCGTGCGTCGAGCCGTACGGAAGTGGACATTCTGCGCGTGCATTCGAGCCCGAGCTTCGGGTTGATGTGGCT
GCTGCCGCGGCTGTCGTCGTTTCAGGAGGCGAACGGCGATATCCAGCTGAATCTGGCGTGCTCTTACGAAAACGTATCGT
TCTCCAACGGCTTTTACGATATCGACGTCCGGCACGGCTACGGCAACTGGGACAACCTCGAGGTCCGGACGGTGCGCGGC
GAGTTCATTGCGCCGCTCGCGTCGCCGCACTACCTCGAGCGGCATCCGGTGAAGGCGCCGGAAGACCTGCTCGCGCATCG
GCTGATCTATTCCGAAACGCCGCTGGTGCAGTGGAAGCAGTGGTTCGGCCGGGCCGGTGTGTCGCTCGCCGCTCAGAAGA
CCTTCGATTTTTCCTTCGACCGCTCGTACATGTCGCTCGAAACCGCGGCACTGGGCCTCGGCATCGCGCTCGAAAGCCTG
ATGCTTGCGTCGGTGAAGATTCGCGAAGGGCTGCTGGTGCCGGTGTTCGACGCAACCCATGCGGTCGAAGTCTGCGCGCA
TCATCTCGTTTACCCGCGGCAGAACGCGGAATTGCCGCGCGTGAAGCGCTTCCTCGCGTGGATCGAGCGGGAGGTCGCGG
GCCACGGGCGGGCGAGCTGA

Protein sequence :
MRIPPLKAIIAFESVARTKSVNRAAEELGLTASAVSHQLSNLESQIGQPLFQRSGRGLVLTPTGERYLTDVTGSLADLSR
ATERASSRTEVDILRVHSSPSFGLMWLLPRLSSFQEANGDIQLNLACSYENVSFSNGFYDIDVRHGYGNWDNLEVRTVRG
EFIAPLASPHYLERHPVKAPEDLLAHRLIYSETPLVQWKQWFGRAGVSLAAQKTFDFSFDRSYMSLETAALGLGIALESL
MLASVKIREGLLVPVFDATHAVEVCAHHLVYPRQNAELPRVKRFLAWIEREVAGHGRAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96226.1 lysR family transcriptional regulator Not tested T-PAI Protein 4e-70 54
unnamed AAT96174.1 lysR family transcriptional regulator Not tested T-PAI Protein 4e-70 54
unnamed AAT96097.1 lysR family transcriptional regulator Not tested T-PAI Protein 5e-70 54
unnamed AAT96053.1 lysR family transcriptional regulator Not tested T-PAI Protein 4e-70 54
unnamed AAT96114.1 lysR family transcriptional regulator Not tested T-PAI Protein 1e-69 53