Gene Information

Name : BamMC406_3650 (BamMC406_3650)
Accession : YP_001810333.1
Strain :
Genome accession: NC_010552
Putative virulence/resistance : Virulence
Product : EvpB family type VI secretion protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3517
EC number : -
Position : 597200 - 598750 bp
Length : 1551 bp
Strand : +
Note : TIGRFAM: type VI secretion protein, EvpB/VC_A0108 family; PFAM: protein of unknown function DUF877; KEGG: rme:Rmet_0624 protein of unknown function DUF877

DNA sequence :
ATGAAATACACTGAAACGCAGCACGCCGGCGCGAGCGAGACCGTCGTGCTGGACGCCCCGCACGGGGATATCGACAGCGT
CTATGCGTCGCTGTGCAGCAAGATCAACCTGAAGCCCGTCAGCGAAGCGCGCCCGCTCGAGGCGTTCCGCGACAACGACA
TGCTGTCCGAGGCGTCGGCCGACGAGCGCATCGCGCGCGGGATGGGCGCATTCCTCGAACTCGTCGCGAACGCGCGCCAG
CCGGTGGACCGCCTCGACAAGTCGCTGCTCGATTTCCATATCGGCCAGATCGACCGGCAGATCAGCCGTCAACTCGACGC
CGTGATGCATACGCCGGAATTCCAGGCGCTCGAGGCACGCTGGCGCGGCCTGAAGATGCTCGTAAGCCGCACCGATTTCC
GCAAGAACGCACGCATCGAAGTGCTTGACGTGTCGAAGGACGCGCTGCAGCGCGACTTCGAGGATACGCCGGAACTGATC
CAGAGCGGCCTGTACCGCCTGACGTACATCGAGGAATACGACACGCCGGGCGGTCAGCCGATCAGCGCGATGATCAGCGA
CTTCGAGTTCGCGAATTCGCCGATGGACGTCGCACTGCTGCGCAACATCTCGAAGGTGGCGGCCGCCGCGCACATGCCGT
TCATCGGCTCGGTCGGGCCGGCGTTCTTCGGCAAGCAGTCGATGGAGGAAGTTGCCGCGATCCAGGATATCGGCAACTAC
TTCGATCGCGCCGAGTACATCAAGTGGAAGAGCTTCCGCGATACCGACGATGCGCGTTACGTCGGCCTGACGATGCCGCG
CGTGCTCGGCCGCTTGCCGTACGGCAAGGACACGGCGCCGGTGCGCGCGTTCAACTACGAGGAGGCCGTCAAGGGCCCCG
ACCACGACAAGTACCTGTGGATGAATGCGTCGTTCGCGTTCGCGGCGAACATGGTGCGCAGCTTCGTGAGCAACGGCTGG
TGCGTGCAGATTCGCGGACCGCAGGCGGGCGGCAAGGTCGAGGACCTGCCGGTTCACCTGTACGACCTCGGCACCGGCCA
CCAGCCGAAGATCCCGACCGAGGTGCTGATCCCCGAAACGCGCGAATTCGAGTTCGCGAATCTCGGCTTCATTCCGCTGT
CGTTCTACAAGAACCACGACTTCGCGTGCTTCTTCTCCGCGAACTCGGCGCAGAAGCCGGCGCTGTACGAGACCCGGGAA
GCGACCGCGAACAGCCGCATCAACGCACGGCTGCCGTACATCTTCCTGCTGTCGCGCATCGCGCACTACCTCAAGCTGAT
CCAGCGGGAGAACATCGGCACGACCAAGGATCGTCGTCTGCTCGAGCTCGAGTTGAACAACTGGATCAAGGGGCTCGTGA
CCGAGATGAAGGATCCGGGTGACGAACTGCAGGCGTCGCATCCGTTGCGCGAGGCGAAGGTCACGGTCGAGGACATCGAG
GACAATCCGGGCTTCTTCCGGATCAAGCTGTTCATCGTCCCGCACTTCCAGGTCGAAGGCATGGACATCGGGCTGTCGCT
CGTGTCGCAGATGCCGAAGTCCAAGAACTGA

Protein sequence :
MKYTETQHAGASETVVLDAPHGDIDSVYASLCSKINLKPVSEARPLEAFRDNDMLSEASADERIARGMGAFLELVANARQ
PVDRLDKSLLDFHIGQIDRQISRQLDAVMHTPEFQALEARWRGLKMLVSRTDFRKNARIEVLDVSKDALQRDFEDTPELI
QSGLYRLTYIEEYDTPGGQPISAMISDFEFANSPMDVALLRNISKVAAAAHMPFIGSVGPAFFGKQSMEEVAAIQDIGNY
FDRAEYIKWKSFRDTDDARYVGLTMPRVLGRLPYGKDTAPVRAFNYEEAVKGPDHDKYLWMNASFAFAANMVRSFVSNGW
CVQIRGPQAGGKVEDLPVHLYDLGTGHQPKIPTEVLIPETREFEFANLGFIPLSFYKNHDFACFFSANSAQKPALYETRE
ATANSRINARLPYIFLLSRIAHYLKLIQRENIGTTKDRRLLELELNNWIKGLVTEMKDPGDELQASHPLREAKVTVEDIE
DNPGFFRIKLFIVPHFQVEGMDIGLSLVSQMPKSKN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec18 YP_851426.1 hypothetical protein Not tested PAI II APEC-O1 Protein 3e-100 42
aec18 AAQ96712.1 Aec18 Not tested AGI-1 Protein 2e-100 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BamMC406_3650 YP_001810333.1 EvpB family type VI secretion protein VFG2475 Protein 9e-113 46
BamMC406_3650 YP_001810333.1 EvpB family type VI secretion protein VFG2093 Protein 3e-109 45
BamMC406_3650 YP_001810333.1 EvpB family type VI secretion protein VFG2070 Protein 4e-86 42