Gene Information

Name : BamMC406_6688 (BamMC406_6688)
Accession : YP_001812341.1
Strain :
Genome accession: NC_010553
Putative virulence/resistance : Unknown
Product : type VI secretion protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3520
EC number : -
Position : 192403 - 193464 bp
Length : 1062 bp
Strand : -
Note : TIGRFAM: type VI secretion protein, VC_A0111 family; PFAM: protein of unknown function DUF1305; KEGG: bte:BTH_II0135 putative cytoplasmic protein

DNA sequence :
ATGGATATGTTCAATTCCACTCCGATCGAGGCCGGCTCGCCGCTGCATCCGGATTCGCTGCGCACATGGTTCGACGAGCG
CGCGCCGTGGCAAGCGGGTTTCCTGAGCCTGCTGCGCACAATCAGCGCACGCGACCCGTCCATGCCGCAGCCCGGCACTG
CCCGCTTGCCGAGAGAGGAGCCGTTCCGCGTCGGTCAGCATCCGTCGATGGCGTTCGCCCCGCGTGAAGTCGCGGCGCTC
GACTTGCGGGGCGGCCGGCTCGACGTCCGGCTTTTCGGGCTAGGGCTCTGGGGGCCGCACGGCCCTCTGCCGCTGCACAT
GACGGAACTGGCGTACAGCCGCTCGGAGAGTCAGCAGGATCAGACACTCATCGCATTCGCCAATCTGTTTCATCATCGCG
CGCTCACGCTGTTCTACCGGGCGTGGGCGTCGGCGCAAGCGACGGTTTCGCTCGACCGGCCGGAGCACGAAACCTTCTCG
TTCTATATCGGCAGCCTGATGGGCACCGATCCCGCCGAAGCAGTGCGCATCCACCCGCCGGCGCACGCGCGCTACGCTGC
GTCGGCGCATCTGGTGCGCGAGGCGCGCAATCCCGACGGTCTCGCGGCGACACTATCCCATTACTTCGGCGTGCCAGTGG
CGGTCGACGAATTCGTGCCGCACTGGATTCAGGTTTCCCGCACGGAGCGCTGCCTGCTCGGTGCGCCGGCGACATCGACC
ATCATGGGCGAGGGCGCGCTGCTCGGCGACATGATCCCCGATTGCCAGCACAAGTTCCGACTCGTAATCGGGCCGCTCGA
TCTTGACCAGTACCTGCGCCTCACGCCCCACGGCGACGACCTGCCCACCTTGGTCGACTGGGTCCGCGCGTTCGTCGGTT
ACGAATACGACTGGGAAATCAAGCTGCTGGTCAAGCCGCACGCCGCGCCGCCGGCACGCGCCGACAGCACGCACCGGCTC
GGTTACTCGACCTGGCTCGGCGAATCCATGGACGACGAGCCCGTCGTCGGAATGGTGTTCGATCCCGAAAAATACTGCGA
CCAACTGGAAAACTCAGCATGA

Protein sequence :
MDMFNSTPIEAGSPLHPDSLRTWFDERAPWQAGFLSLLRTISARDPSMPQPGTARLPREEPFRVGQHPSMAFAPREVAAL
DLRGGRLDVRLFGLGLWGPHGPLPLHMTELAYSRSESQQDQTLIAFANLFHHRALTLFYRAWASAQATVSLDRPEHETFS
FYIGSLMGTDPAEAVRIHPPAHARYAASAHLVREARNPDGLAATLSHYFGVPVAVDEFVPHWIQVSRTERCLLGAPATST
IMGEGALLGDMIPDCQHKFRLVIGPLDLDQYLRLTPHGDDLPTLVDWVRAFVGYEYDWEIKLLVKPHAAPPARADSTHRL
GYSTWLGESMDDEPVVGMVFDPEKYCDQLENSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0288 NP_454870.1 hypothetical protein Not tested SPI-6 Protein 4e-71 55