Gene Information

Name : Oter_1293 (Oter_1293)
Accession : YP_001818178.1
Strain : Opitutus terrae PB90-1
Genome accession: NC_010571
Putative virulence/resistance : Virulence
Product : microcompartments protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 1603882 - 1604175 bp
Length : 294 bp
Strand : +
Note : PFAM: microcompartments protein; KEGG: maq:Maqu_1232 microcompartments protein

DNA sequence : 
ATGTCCCAACCCGCCCTCGGTCTCCTCGAAACGCGCGGTCTCACGGCGCTCGTCGCCGGTACCGACGCCATGCTCAAGTC
TGCCAACGTCACGCTCGTCGGTCCGATGAAACAGGTCGGCAACGCGCTCGTGACCGCGGTTGTCACCGGCGATGTCGCCG
CCGTCAAGGCCGCGACCGAAGCCGGCGCCGCCGCCGCCCGCCAATACGGCGAGGTCGTCACCGTGCAGGTGATCGCCCGG
CCGCACGACGACATCGCCAGCGTTCTCCCGAAAGCGCCCGCTGCCAAAAAGTGA

Protein sequence : 
MSQPALGLLETRGLTALVAGTDAMLKSANVTLVGPMKQVGNALVTAVVTGDVAAVKAATEAGAAAARQYGEVVTVQVIAR
PHDDIASVLPKAPAAKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 6e-07 57
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 3e-06 56
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 8e-06 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Oter_1293 YP_001818178.1 microcompartments protein VFG1596 Protein 2e-07 57
Oter_1293 YP_001818178.1 microcompartments protein VFG1598 Protein 1e-06 56
Oter_1293 YP_001818178.1 microcompartments protein VFG1597 Protein 3e-06 56