Gene Information

Name : XfasM23_1499 (XfasM23_1499)
Accession : YP_001830183.1
Strain : Xylella fastidiosa M23
Genome accession: NC_010577
Putative virulence/resistance : Virulence
Product : type I secretion system ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG2274
EC number : -
Position : 1659828 - 1661990 bp
Length : 2163 bp
Strand : +
Note : KEGG: cvi:CV_0513 hemolysin B; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter transmembrane region; ABC transporter related; peptidase C39 bacteriocin processing; SMART: AAA ATPase

DNA sequence :
ATGACATACAAAAATCCCCTTGCAACGCAACAGAATCAACGCGCTTCCAATCCACAGCCTGACAGCGCACTCCACGGCTT
AGTGCTCCTTGCCCAATTCCATGGCATTGCGGCTGACCCCGTACAGATAGCGCATGACTTCGGGCGCAGTGGCGAACCAT
TCGATGAAACAACCTTGCTACTGGCCGCCAAAAAACTTGGACTAAAAGCCAAAGTCGTCACCCAACCGGTCACCCGTATC
GCAATGGCCGCATTACCTGCACTCGCACTGATCCCTGGAGGAACAGCATTTATCGTCGCCAAAGTGACAGGCAACCAGAT
ACTGATCCACGACCTGGCAGATCAACGGCCACGCACAATCTCACACGATGAATTTACCGCACGCTACGCCGGCCGCTTAC
TCCAAGTCGCCTCCCGCGCATCGGTCCTAGGAAATCTGGCTAAATTCGACTTTAGCTGGTTCATCCCCGCAGTGGTCAAA
TATCGCAAACTGCTGGCTGAAGTCTTTGCAGTGTCCTTATTTATCCAGATATTCGCACTGGTGACACCCCTGTTCTACCA
AGTCGTGATGGACAAAGTGCTCGTACACCAAGCACTCAGCACCCTTGAAGTCATTGTCGTTGGCCTCATCTCCCTGGCCT
TATTCGAAGTAGTACTCACCGCACTACGCACCCATGTCTTCGCACATACCACCAGCAAAATTGATGTTGAACTCGGCGCA
CGCTTATTCCGCCATCTATTAGCATTACCGTTAGCGTATTTTGAATCGCGCCGGGTTGGCGACACCATCGCCCGCGTACG
CGAACTAGAAAACATCCGCCACTTCCTCACCGGCCAAGCACTGACCTCCGTCTTAGACCTCCTATTCACCGTCGTCTTTT
TGTCCGTCATGTTTTGGTACAGCGGCTGGCTCACCCTGATTGTGGTGATCTCATTACCCCTGTACGCACTGATCTCCGCA
TTCATCACCCCAGTACTCCGCAAACGTCTGGATGAAAAATTTGCACGCGGCGCAGACAACCAAGCATTTTTAGTGGAAAC
CGTCAGCGGCATTGGCACCGTTAAAGCAATGGCCGTAGACCCACGTGTCACCCGCACCTGGGACAACCAACTGGCAGGCT
ACGTTGGTGCCAGCTTTAGCGTTACCAAAATTGCCACCCTCGGCCAACAGAGCGTTCAATTAGTACAGAAACTGACCAAC
GTCGCCGTATTATTTTGGGGCGCCAAACTGGTAATTGACGGACAACTGTCCCTCGGACAACTAATTGCCTTCAACATGTT
GTCCGGCCAAGTCACTGCCCCCATCATCCGACTCGCCCAGCTATGGCAGGATTTTCAACAAGTCGGACTCTCTGTCGAAC
GACTCGGCGAAATTCTGAACACCCGTACCGAACTCCCCGGCAGCCGCATGACATTGCCGCCCATCCAAGGGCGCATCACC
TTCGAGCGCCTCATCTTCCGTTACCGTCCAGATACCCCCGACGTACTCTCCGGAATCGACCTAGACATCCAACCTGGCGA
AGTCATCGGCATCGTAGGACGCTCCGGTTCAGGGAAAAGCACCCTGACAAAACTCGTACAGCGCATGTACGTCCCAGAAC
GCGGCCGCGTCTTGGTCGACAGCCACGACCTCTCATTGGCCGATCCCGCCTGGCTGCGTCGCCAAATTGGCGTCGTACTG
CAAGAAAATTTCCTGTTCAACCGCAGCGTCCGTGAAAACATCGCCATGGCCGACCCGGGAATCCCCCTGGAACGCGTCAT
CCACGCAGCGACATTAGCCGGTGCCCATACCTTCATTTCTGAACTACCAGAAGGCTATGACACCAAGATTGGCGAACACG
GTACAGGACTCTCCGGCGGCCAACGCCAACGCATCGCAATTGCCCGCGCCCTGATTGGCGACCCACGCATCCTTATTTTC
GATGAAGCCACCAGCGCACTCGACTACGAATCAGAACATGCCGTCATGCAAAACATGCGAGCCATTTGCAAAGGCCGCAC
CGTTCTCATCATCGCCCACCGCCTCTCCACAGTCCGTAATGCCGATCGTATCGTCGTCATTGATAAAGGGAAAATCGTAG
AAAGCGGCTCCCACGAAACACTCCTCAACCGCAACAACGGTCATTACGCCCACCTCTACCGACTCCAACAAGGGACCACA
TGA

Protein sequence :
MTYKNPLATQQNQRASNPQPDSALHGLVLLAQFHGIAADPVQIAHDFGRSGEPFDETTLLLAAKKLGLKAKVVTQPVTRI
AMAALPALALIPGGTAFIVAKVTGNQILIHDLADQRPRTISHDEFTARYAGRLLQVASRASVLGNLAKFDFSWFIPAVVK
YRKLLAEVFAVSLFIQIFALVTPLFYQVVMDKVLVHQALSTLEVIVVGLISLALFEVVLTALRTHVFAHTTSKIDVELGA
RLFRHLLALPLAYFESRRVGDTIARVRELENIRHFLTGQALTSVLDLLFTVVFLSVMFWYSGWLTLIVVISLPLYALISA
FITPVLRKRLDEKFARGADNQAFLVETVSGIGTVKAMAVDPRVTRTWDNQLAGYVGASFSVTKIATLGQQSVQLVQKLTN
VAVLFWGAKLVIDGQLSLGQLIAFNMLSGQVTAPIIRLAQLWQDFQQVGLSVERLGEILNTRTELPGSRMTLPPIQGRIT
FERLIFRYRPDTPDVLSGIDLDIQPGEVIGIVGRSGSGKSTLTKLVQRMYVPERGRVLVDSHDLSLADPAWLRRQIGVVL
QENFLFNRSVRENIAMADPGIPLERVIHAATLAGAHTFISELPEGYDTKIGEHGTGLSGGQRQRIAIARALIGDPRILIF
DEATSALDYESEHAVMQNMRAICKGRTVLIIAHRLSTVRNADRIVVIDKGKIVESGSHETLLNRNNGHYAHLYRLQQGTT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hlyB NP_755448.1 hemolysin B Virulence PAI I CFT073 Protein 0.0 62
hlyB CAD33760.1 hemolysin B Virulence PAI I 536 Protein 0.0 62
hlyB CAD42038.1 HlyB protein Virulence PAI II 536 Protein 0.0 62

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XfasM23_1499 YP_001830183.1 type I secretion system ATPase VFG1501 Protein 0.0 62
XfasM23_1499 YP_001830183.1 type I secretion system ATPase VFG0907 Protein 0.0 62
XfasM23_1499 YP_001830183.1 type I secretion system ATPase VFG1557 Protein 0.0 62
XfasM23_1499 YP_001830183.1 type I secretion system ATPase VFG0841 Protein 0.0 61
XfasM23_1499 YP_001830183.1 type I secretion system ATPase VFG1269 Protein 0.0 59