Gene Information

Name : XfasM23_1578 (XfasM23_1578)
Accession : YP_001830260.1
Strain : Xylella fastidiosa M23
Genome accession: NC_010577
Putative virulence/resistance : Unknown
Product : RNA methyltransferase
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0565
EC number : -
Position : 1750558 - 1751349 bp
Length : 792 bp
Strand : -
Note : TIGRFAM: RNA methyltransferase, TrmH family, group 1; PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: xoo:XOO2710 tRNA/rRNA methyltransferase

DNA sequence :
ATGCAGCACTACACTTCTTTGGTCTCCCTCACCATGTTTGCATTCCCGCGTCTGCGTTTTGTCCTTGTTGGTACCCAGCA
TCCAGGCAACATCGGTGCGGCTGCCCGCGCCATGAAGACGATGGGGATATCGCGTTTGGTCCTGGTTGCGCCCGAATGCC
AGCTCGATGAACATGCTTACCGGCGTTCGGCAGGCGCTGAAGATGTCCTGGAGGCCGCCTCCGTGCATACCGTTCTGGCC
GATGCCGTGGCCGATTGCACCTTTGTGCTTGGATGCACCGCACGCACGCGCCGTGTTGCCTTTGAGGAACTACGTCCGGC
AGCAGCGGCATCCCAGATCCTGACGAACATTAACGCAGCAGGTGAAGTCGCGTTGTTGTTTGGACGCGAACGCACCGGAC
TGACCAACGAAGAACTGCAGCTATGCCATGTTGCCGTGCATATTCCTGCTGATCCACTGTTTAGCTCATTGAACCTGGCC
GCTGCCGTGCAGATCTTGGCCTATGAAATCCGTTTGGCATCTCTTGATGCACCCTCCGCGCCCCTCCATTCAACCTCAGG
ATTCCGCAAGACACCCGCCAGCCATGCCCAACTGGAAGGTTTATTCGGCCAATTCAAACAGACCTTGGATGAGATCGATT
TTCACAAAGGGCGCGCCCCGGAATCGGCAATGCGCAAATTGCGTCGCCTCTTTGCCAAGGCCGAACTAACCCAGCAAGAA
ATAAGATTACTTCGGGGAGTACTCTCCGATGTCCAACGTATCGTCATGCTGAAACGTCAGCGCGACACCTGA

Protein sequence :
MQHYTSLVSLTMFAFPRLRFVLVGTQHPGNIGAAARAMKTMGISRLVLVAPECQLDEHAYRRSAGAEDVLEAASVHTVLA
DAVADCTFVLGCTARTRRVAFEELRPAAAASQILTNINAAGEVALLFGRERTGLTNEELQLCHVAVHIPADPLFSSLNLA
AAVQILAYEIRLASLDAPSAPLHSTSGFRKTPASHAQLEGLFGQFKQTLDEIDFHKGRAPESAMRKLRRLFAKAELTQQE
IRLLRGVLSDVQRIVMLKRQRDT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96063.1 group 1 trmH family protein Not tested T-PAI Protein 5e-51 47