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Name : secD (XfasM23_0169) Accession : YP_001828900.1 Strain : Xylella fastidiosa M23 Genome accession: NC_010577 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 231693 - 233537 bp Length : 1845 bp Strand : + Note : part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of DNA sequence : ATGCTTGAATTACCCCGTTGGAAATATGTTCTTATTTTTGTTGTGCTTGTGTTGAGCACGCTGTACGCGTTACCAAACGT GTATCAGAAAGATCCTTCCGTGCAGATTACCGCCAATCGAGGCGGCCATATCGACGATGCATTCCGCCAGCAGGTGATGA CTGATCTTCAAGCATCCGGCATTGTGCCTAAGGCCGTGACCAAGGAGGGGGAGAGCCTGATGGTGCGCTTGATGTCGTTG GAGATGCAGACCCGTGCCAGCGATGTGTTGCGGGCTAAGGTGGGTGAGAATTACACCGTTGCATTGAATCTCGCTTCCAC TGTGCCAGATTGGTTGGCTAAGTTGGGTGGGCGACCGATGGTGTTAGGTTTGGATCTGGTTGGCGGTGTGCATTTCGCGC TTCAGGTGGATCAGAAGGCCGCTCTGAATAAACGTATGGATGCTTTTGTTGAGGAGGTACGTTCGACGTTGGGTAGCAAG CGTATTGGCTTCCGCATGGTCGAACGCCGTCCGGACAACACGATTCGAGTGACGTTTGATGATGATGCTCATCTCAATGA AGCACGTATGGTGTTGTTTAAGGAGCAAGTGGGGCTGAGTTATTCGGTATCCGGAAATACTTTGATTGCTCGTGTTTCTG AGAATGAGTTGCGTCAGATTGCCAGTGGTGCGGTTGAGCAAAATTTGACGACTCTGCGTAATCGCATCAATGAATTAGGC GTGGCCGAACCAATTATCCAACGTCAGGGGGATGATCGTATTGTTGTTGAGTTGCCTGGTGTTCAGGATACTGCTGAGGC TAAACGTCTGATAGGTGCGACTGCTACGCTGGAGTTTCGGGGTGTGGTCGACGGTGATGCCTATGAGGCAGTCCGTACTG GGAATGTTCCTCCTGAGGCCAGGGTGTATTACATACGCGGCACCAACCAGCCAGTTTTATTGAATAAGCGTGTGATTGTT TCTGGTGATGAGATGGTGAATGCCACTGTCGGTGTGGATGAGAACGGCATGCCAGCGGTCAATGTCACCCTCAGTAATGC TGCTGGTCAGCGTATGTTGGACTACACCCAGCGCAACCTTTACAAGCTGATGTCTGTGGTCTACATCGAGCGTATTCCGA CTGTGAGCATGGTTGATGGTAAGGAAGTGCGTGGCGTGCGGTTGAAGGAAGAGGCATTGTCCCCAACACGGATTGCTGGG GTATTTGGAAAAAACTTCCGTACCACCGGGTTGGAGAAGACTGAGGCTGAAAATCTGTCTAAATTGTTGCGCGCTGGTTC GTTGGCTGCACCGATGGATTTCGTTGAGGAATATGTGATCGGTCCTAGTTTGGGTGCAGAGAATGTAGAACGTGGTGTGA CTGCAGTGGTGTTTTCTTTCTTATTCACCCTGGTGTTTTTCACCATCTATTACCGCATGTTTGGTGTGATTACTTCATTG GCATTGCTGTTTAATCTGTTGATTGTGGTAGCTGTGATGTCGCTGTTTGGTGCAACCATGACTTTGCCGGGTTTTGCCGG GTTGGCGCTGTCGGTCGGGCTTTCGGTGGATGCTAACGTGTTGATCAACGAGCGTATCCGTGAGGAGTTGCGTCACGGGA TGCCTCCGAGATCGGCGATTGTGGCCGGTTACGACAAGGCGGGTAGCACGATTCTTGATGCCAATTTGACCGGACTGATT GTTGGTGTTGCCTTGTATGCTTTCGGAACCGGTCCTTTGAAGGGCTTTGCGTTGACTATGATTATCGGGATTTTCGCCTC AATGTTTACTGCGATTACGGTATCGCGTTCGCTCTCTGCGCTGATTTACGGTACGCGCAACAATCTCAAGTCTTTGGCTA TCTGA Protein sequence : MLELPRWKYVLIFVVLVLSTLYALPNVYQKDPSVQITANRGGHIDDAFRQQVMTDLQASGIVPKAVTKEGESLMVRLMSL EMQTRASDVLRAKVGENYTVALNLASTVPDWLAKLGGRPMVLGLDLVGGVHFALQVDQKAALNKRMDAFVEEVRSTLGSK RIGFRMVERRPDNTIRVTFDDDAHLNEARMVLFKEQVGLSYSVSGNTLIARVSENELRQIASGAVEQNLTTLRNRINELG VAEPIIQRQGDDRIVVELPGVQDTAEAKRLIGATATLEFRGVVDGDAYEAVRTGNVPPEARVYYIRGTNQPVLLNKRVIV SGDEMVNATVGVDENGMPAVNVTLSNAAGQRMLDYTQRNLYKLMSVVYIERIPTVSMVDGKEVRGVRLKEEALSPTRIAG VFGKNFRTTGLEKTEAENLSKLLRAGSLAAPMDFVEEYVIGPSLGAENVERGVTAVVFSFLFTLVFFTIYYRMFGVITSL ALLFNLLIVVAVMSLFGATMTLPGFAGLALSVGLSVDANVLINERIREELRHGMPPRSAIVAGYDKAGSTILDANLTGLI VGVALYAFGTGPLKGFALTMIIGIFASMFTAITVSRSLSALIYGTRNNLKSLAI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 3e-102 | 44 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 3e-102 | 44 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 2e-102 | 44 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 2e-102 | 44 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 2e-102 | 44 |
