Gene Information

Name : secF (XfasM23_0170)
Accession : YP_001828901.1
Strain : Xylella fastidiosa M23
Genome accession: NC_010577
Putative virulence/resistance : Unknown
Product : preprotein translocase subunit SecF
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG0341
EC number : -
Position : 233557 - 234522 bp
Length : 966 bp
Strand : +
Note : forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins f

DNA sequence :
ATGAAATTATTCCCGCTGCATCTCATTCCGAACGACACCAAGATCGACTTCATGCGCTGGCGTAAACCGACGTTGAGTTT
GATGTCGATACTTTTTGCAATATCAGTCTTGGTTGTCGTTTTTAAGGGATTTAACTATGCGCTGGAATTTACCGGCGGCA
CGCTAGTGCGTACTCAGTTCGCCAAGCCTGTGGATGCCGATCAGGTGCGTCAGCGGCTGGAGGTTGGTGGTTTAGGGAAT
GCACAGGTACAGAGCGTCGGGGGTGGCAACGAGTTGCTGATCCGTTTGCAGCCGTATGGCGAGCATAATAACGATGATGT
GGCCAAAAACGCTGCCGAAGCTGTGCGCAAAGTGATTACGTTGCCGGATAATCCGGCAACTGTACAGCCTGGGGAATTCG
TTGGTCCACAGGTGGGAAAAGATCTCGCGATGAATGGTGTATACGCAACGATCTTTATGCTGTTGGGTTTTTTGATTTAT
ATCGGGTTTCGGTTTGAGTGGAAGTTTGCGGTTGCAGCCAGTCTAACGGCGTTCTTCGATCTGATTTTGACGATCGCTTA
TATGTCGCTGCTTGGTCGGGAGTTCGACTTGACTGTTCTGGCTGGCTTGTTGTCTGTGATGGGTTTTGCGATCAATGACA
TCATTGTGGTGTTTGACCGTGTGCGTGAGAACTTCCGTAGCCTGCGTGTGGAGCCGTTAGAGGTGTTGAATCGTTCGATC
AATCAGACGCTATCTCGTACGGTGATTACGGCGGTCATGTTCTTTCTGTCGGCGTTTGCGTTGTACTTGTACGGCGGCCG
CTCAATGGAGGGGTTGGCTGAAACCCATATGGCTGGTGCGGTGATTGTGGTGGTGTCTTCAGTGGTTATGGCGGTGCCAT
TGTTAACCATTGGCCCTTTAAAGGTCAGTAAGCAAGATTTGCTGCCGAAGGCGAAAGACCTGGAGTCATTGGAGCGCCGT
CCTTAA

Protein sequence :
MKLFPLHLIPNDTKIDFMRWRKPTLSLMSILFAISVLVVVFKGFNYALEFTGGTLVRTQFAKPVDADQVRQRLEVGGLGN
AQVQSVGGGNELLIRLQPYGEHNNDDVAKNAAEAVRKVITLPDNPATVQPGEFVGPQVGKDLAMNGVYATIFMLLGFLIY
IGFRFEWKFAVAASLTAFFDLILTIAYMSLLGREFDLTVLAGLLSVMGFAINDIIVVFDRVRENFRSLRVEPLEVLNRSI
NQTLSRTVITAVMFFLSAFALYLYGGRSMEGLAETHMAGAVIVVVSSVVMAVPLLTIGPLKVSKQDLLPKAKDLESLERR
P

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
secF AAT96102.1 SecF Not tested T-PAI Protein 2e-41 43
secF AAT96066.1 SecF Not tested T-PAI Protein 8e-42 43