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Name : secD (ACICU_03166) Accession : YP_001847825.1 Strain : Acinetobacter baumannii ACICU Genome accession: NC_010611 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 3370297 - 3372198 bp Length : 1902 bp Strand : + Note : part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of DNA sequence : ATGCGTTACCCTGCATGGAAATATTTACTGATTCTGGTTGTTCTGGTAGTCAGTACATTATACGCACTGCCTAGTCTATA TCCGGATGAGCCCGCCGTTCAAATTTCCGGTGCCAAAGCTGGTACCCAAATTGATCAAAGTGTGGTGCAAAAAGCAGAGC AAATTTTAAAAACAGCAAATATTGCAAGCCACGATAATACTTTTACAAATAATGCTGCTCTCTTGCGTGTCAGCTCTTCT GAAGCGCAATTGAAAGCAAAAGAAGTATTACGCCGTGACTTAGGTGATCAATATGTTGTAGCCCTAAACCTTGCACCAAC AACTCCAGAATGGTTGCAAAAAATTGGGGCGAAACCAATGAAACTTGGTTTGGACTTACGTGGTGGTGTCCACTTCTTGC TTGAAGTAGATATGGACAAAGCCATTTCCCAACGTATGGAAACCTCTGCCACTGATTTGCGTCGTCAGTTCCGTGAAAAC AAAATTAAATTTAACAATCTTGCGTTAAATAATAATGTGATCACTGTTCAGTTTGCTGACAATGCGGATCGTGATGCAGC AATGGATTTTTTACGCCGTAATGGTAATGAATATACCCAACAGGCATTAGCGAGCACGACAGGTTCAATCTTAAAGCTCA CTTATACTGATGTACGTCGTCAAGAAATTCAGGCTTATGCAGTTAATCAGAACTTAACAACACTACGTAACCGTATTAAC GAACTTGGTGTTGCAGAAGCTTTAGTACAAAGTCAGGGTAGCAACCGTATTGTCGTTGAATTACCGGGTGTTCAAGATAC AGCAGAAGCTAAACGTGTTTTAGGCCGTACTGCTAACCTCGAATTCCGTTTGGTATCTGACTTAAATGATCAATATATTG ATCCATATACGGGTAAATATAATGGTCAACCGTTACCTCCGGGTACGGAAGTTTTTGCTTATCAGTCTTTAGATAGTGGT CGCCAACTGTTGTTGCAACGTAACCGTATCTTGACTGGTGAACGCGTTCAAAATGCAAGTTCTGGCTTTAGCCAAGACTC TGGTGGTGCCGAAGTAAATATTACGCTCGATAGTGCTGGCGGTAAGCTGATGTCAGATGCAACCCGTAATGCAGTTGGAA AACGCATGGCGGTATTGTTCATCGAAAATAAACAAAAGATTAGCTACGTTACAGATCCAAAAACTGGTGCTCAAACAGAA GTTCGTACACCATATACCGAGTCTGTCGTGATTAATGCCGCAACCGTCCAAGCCGTTTTAGGTTCAACTTTCCGTATTAC TGGTTTAAGTTCACCTCAAGAAGCATCTGAACTTGCGTTAATGCTTCGTGCCGGTGCTTTAGCTGCGCCAATGTACTTCG TTGAAGAGCGTGTTGTTGGTCCAAGCCTTGGTCAAGAAAACATTGATAAAGGTGTACTATCAACGCAAATCGGTTTCTTG CTTGTTGCAATCTGGATGGTCGTGTTCTTCCGTCTATTTGGTTTAATCGCGAACTTTGCACTTGTATTTAACTTGGCAAT GATTTTAACCATTATGTCTTGGATAGGTGCTTCCCTCACCTTACCGGGTATTGCGGGTATCGTCATCACCATTGGTATGG CCGTCGACGCCAACGTACTGATATGTGAACGTATTCGAGAAGAAATGCTCTGGGGGGCCTCACCTAAACAGGCTATTGTG GCAGGTTATGATCGAGCCTATAACACCATTTTCGACTCGAACTTAACAACGTTCCTTGTTGCATTCATTCTGTTTGCAAT CGGTACTGGCCCGATTAAAGGTTTCGCCGTGACATTAATGATCGGTATTATTTGCTCAATGTTTACTGCAATTACAGTAA CGCGTGCGATTGTACAAATCATTTATGGTAAACGCCGTAACTTGAAAAAGTTGAGCATTTAA Protein sequence : MRYPAWKYLLILVVLVVSTLYALPSLYPDEPAVQISGAKAGTQIDQSVVQKAEQILKTANIASHDNTFTNNAALLRVSSS EAQLKAKEVLRRDLGDQYVVALNLAPTTPEWLQKIGAKPMKLGLDLRGGVHFLLEVDMDKAISQRMETSATDLRRQFREN KIKFNNLALNNNVITVQFADNADRDAAMDFLRRNGNEYTQQALASTTGSILKLTYTDVRRQEIQAYAVNQNLTTLRNRIN ELGVAEALVQSQGSNRIVVELPGVQDTAEAKRVLGRTANLEFRLVSDLNDQYIDPYTGKYNGQPLPPGTEVFAYQSLDSG RQLLLQRNRILTGERVQNASSGFSQDSGGAEVNITLDSAGGKLMSDATRNAVGKRMAVLFIENKQKISYVTDPKTGAQTE VRTPYTESVVINAATVQAVLGSTFRITGLSSPQEASELALMLRAGALAAPMYFVEERVVGPSLGQENIDKGVLSTQIGFL LVAIWMVVFFRLFGLIANFALVFNLAMILTIMSWIGASLTLPGIAGIVITIGMAVDANVLICERIREEMLWGASPKQAIV AGYDRAYNTIFDSNLTTFLVAFILFAIGTGPIKGFAVTLMIGIICSMFTAITVTRAIVQIIYGKRRNLKKLSI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 4e-144 | 52 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 3e-144 | 52 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 3e-144 | 52 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 3e-144 | 52 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 2e-144 | 52 |
