Gene Information

Name : glcB (MMAR_2713)
Accession : YP_001851011.1
Strain : Mycobacterium marinum M
Genome accession: NC_010612
Putative virulence/resistance : Unknown
Product : malate synthase G
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG2225
EC number : -
Position : 3311551 - 3313746 bp
Length : 2196 bp
Strand : -
Note : catalyzes the formation of malate from glyoxylate and acetyl-CoA

DNA sequence :
ATGACGGATCGCGTGTCGGCGGGGAATTTGCGCGTCGCTCGGGTGCTCTACGACTTCGTAAACAACGAGGCCCTGCCCGG
CACCGACATCGACCAGGACAGCTTCTGGGCGGGCGTGGACAAGGTGGTCACCGACCTCACCCCGCAGAACCAGGATTTGC
TGAAGACTCGCGATGATCTGCAGGCCCAGATCGACAAGTGGCATCGCCACCGGGTGATCGAGCCGTTGGACCCGCAGGCC
TACCGCGAGTTCCTCACCGAGATCGGGTACCTGCTGCCGGCACCCGAGGACTTCACCATCACCACCTCCGGGGTTGACGA
CGAGATCACCACGACCGCCGGCCCGCAGCTGGTGGTGCCGATCCTCAACGCGCGGTTCGCCCTCAACGCTGCCAACGCCC
GCTGGGGCTCGCTCTACGACGCCTTGTACGGCACCGACGTCATCTCCGAAAGCGACGGCGCCGAAAAGGGCCGGGGCTAC
AACAAGGTCCGTGGTGACAAGGTAATCGCCTACGCGCGCCAGTTCCTCGACGACAGCGTGCCGCTGGCGGGGGCCTCCTA
CACCGATGCCACAGGCTTCAAGGTGGAAGACGGACAGCTGGTGGTGTCGCTGGCGGACACGTCCGCAGCGCTGGCCGATC
CCGGCCAGTTCGCCGGCTACACCGGCACCGCCGAGAACCCTAAGTCGATCCTGCTGGCCAATCACGGGCTGCACATCGAG
ATCCTGATCGACCCCGAGTCGCAGATCGGTGCCACCGACGGCGCCGGCGTCAAGGACGTGATCCTGGAGTCCGCCATCAC
CACGATCATGGACTTCGAGGACTCGGTGGCCGCGGTCGACGCTGACGACAAGGTGCTGGGCTATCGGAACTGGCTCGGAC
TGAACCGGGGCGATCTGTCCGAGGACGTCACCAAGGACGACAAGACCTTCACCCGGGTGCTCAACACCGACCGCACCTAC
ACCGCCCCGCACGGTGGTGAGCTGACCTTGCCCGGCCGCAGCCTGTTGTTCGTCCGCAACGTGGGCCACCTGATGACCAA
CGACGCCATCGTTTCGGACGCGGAAGGCGCCGAGGGCGCCCCGGTGTTCGAGGGCATCATGGATGCGCTGTTCACCGGCC
TGATCGCCATCCACGGTCTGCGAAGCACCGATGCCAACGGGCTGTTGACCAACAGCCGCACGGGCTCCATCTACATCGTC
AAGCCCAAGATGCACGGTCCCGCCGAGGTGGCGTTCACCTGTGAATTGTTCAGCCGCGTCGAGGACGTGCTGGGGTTGCC
GCAGGGGACCATGAAGGTCGGCATCATGGACGAAGAGCGACGTACCACGCTCAACTTGAAGGCATGCATCAAGGCGGCCG
CCGACCGGGTGGTGTTTATCAACACCGGCTTCCTGGACCGCACCGGTGATGAGATCCACACCTCGATGGAAGCCGGCCCG
ATGATCCGCAAGGGCGCGATGAAGAACACGGCGTGGATCAAGGCCTACGAGGACGCCAACGTCGACACCGGGCTCGCCGC
CGGCTTCTCCGGTAAGGCGCAGATCGGCAAGGGCATGTGGGCGATGACCGAACTGATGGCCGACATGGTGGAGCAGAAGA
TTGCCCAGCCGAAGGCCGGCGCGACCACCGCGTGGGTGCCATCGCCCACCGCGGCCACCCTGCACGCGATGCACTATCAC
AAGGTGGATGTCTTTGCCGTGCAGAAGGAGCTGCAGGGCAAGACCCGCACCAGCGTTGACGAATTGCTGACCATTCCGTT
GGCCAAGGAACTGGCCTGGGCGCCCGAGGAGATCCGCGAAGAGGTCGACAACAACTGCCAGTCCATCCTCGGTTACGTGG
TGCGTTGGATCGACCAGGGCGTCGGCTGTTCGAAGGTTCCCGACATCCACAACGTGGCCCTCATGGAGGACCGCGCCACC
CTGCGGATTTCCAGCCAGTTGCTGGCCAACTGGCTACGGCATGGCGTGATCACCAGCGAGGATGCGCGGGCTAGCCTCGA
GCGCATGGCACCGCTGGTGGACAAGCAGAACGCCGGAGATCCCGAATACCACGCGATGGCACCCAATTTCGACGACAGCA
TCGCATTCCTGGCGGCCCAGGATCTGATCTTGTCGGGGGCACAGCAGCCCAACGGATACACGGAGCCGATCCTGCACCGC
CGTCGTCGTGAATTGAAGGCACGCGCTGGTGCCTGA

Protein sequence :
MTDRVSAGNLRVARVLYDFVNNEALPGTDIDQDSFWAGVDKVVTDLTPQNQDLLKTRDDLQAQIDKWHRHRVIEPLDPQA
YREFLTEIGYLLPAPEDFTITTSGVDDEITTTAGPQLVVPILNARFALNAANARWGSLYDALYGTDVISESDGAEKGRGY
NKVRGDKVIAYARQFLDDSVPLAGASYTDATGFKVEDGQLVVSLADTSAALADPGQFAGYTGTAENPKSILLANHGLHIE
ILIDPESQIGATDGAGVKDVILESAITTIMDFEDSVAAVDADDKVLGYRNWLGLNRGDLSEDVTKDDKTFTRVLNTDRTY
TAPHGGELTLPGRSLLFVRNVGHLMTNDAIVSDAEGAEGAPVFEGIMDALFTGLIAIHGLRSTDANGLLTNSRTGSIYIV
KPKMHGPAEVAFTCELFSRVEDVLGLPQGTMKVGIMDEERRTTLNLKACIKAAADRVVFINTGFLDRTGDEIHTSMEAGP
MIRKGAMKNTAWIKAYEDANVDTGLAAGFSGKAQIGKGMWAMTELMADMVEQKIAQPKAGATTAWVPSPTAATLHAMHYH
KVDVFAVQKELQGKTRTSVDELLTIPLAKELAWAPEEIREEVDNNCQSILGYVVRWIDQGVGCSKVPDIHNVALMEDRAT
LRISSQLLANWLRHGVITSEDARASLERMAPLVDKQNAGDPEYHAMAPNFDDSIAFLAAQDLILSGAQQPNGYTEPILHR
RRRELKARAGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glcB CAE85241.1 GlcB protein, malate synthase G Not tested PAI V 536 Protein 0.0 58