Gene Information

Name : KRH_16300 (KRH_16300)
Accession : YP_001855483.1
Strain : Kocuria rhizophila DC2201
Genome accession: NC_010617
Putative virulence/resistance : Virulence
Product : putative ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1847213 - 1847929 bp
Length : 717 bp
Strand : -
Note : -

DNA sequence : 
GTGGCGGTCGATGACGCCGCCGCGCCGGCTCTGAGCGTCCGGGACGTCTCGCTCGAGTACCCGGACGGCACGGCCAACGA
CGGCACCCCGCGCACCGTGCGCGCCCTGGACCACGTGTCCCTGGAGCTGCAGCGCGGGGACATGACCGCACTGATCGGCC
CGTCCGGGTCCGGCAAGTCCTCCCTGCTGGCCGTGGCCGCCGCACTCATCAAGCCCACCTCGGGCACCGTGATGGTCGCG
GGACAGTCCCTCACCGAGCTGCCCGAGAGGGACCTCGCCCGGATCCGCCGGGGCCACACCGGCATGGTCTTCCAGCAGCC
CAACCTGCTGGCCGCCCTGACCTCCCGCGAGCAGCTCGTGCTGGCCGCCCACGTGGCCGGTGCCCGCGGCAAGGAGCTGA
AGGAGGCCAAGACCCGTGCGGACGAGCTGCTGCAGAAGGTCGGTCTCGTGGACTGCGGCGACCGCCGCCCGCACCAGCTC
TCGGGCGGACAGCGGCAACGGGTGAACATCGCCCGGGCCCTGATGAACGACCCCCAGCTGCTGCTCGTGGACGAGCCCAC
CGCGGCACTGGACCAGGAGCGCTCGCGCAGCATCATGGAGCTGCTCGCCGAGCTCACGCACCAGTTCGGTCTCGCGTCCC
TGGTGGTCACCCACGACACCGAGTTCGTGCCCCTCGCGGACCGGTGCGTGACCATGGAGGACGGGCGCCTGCAGTGA

Protein sequence : 
MAVDDAAAPALSVRDVSLEYPDGTANDGTPRTVRALDHVSLELQRGDMTALIGPSGSGKSSLLAVAAALIKPTSGTVMVA
GQSLTELPERDLARIRRGHTGMVFQQPNLLAALTSREQLVLAAHVAGARGKELKEAKTRADELLQKVGLVDCGDRRPHQL
SGGQRQRVNIARALMNDPQLLLVDEPTAALDQERSRSIMELLAELTHQFGLASLVVTHDTEFVPLADRCVTMEDGRLQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-31 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
KRH_16300 YP_001855483.1 putative ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 3e-26 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
KRH_16300 YP_001855483.1 putative ABC transporter ATP-binding protein VFG2059 Protein 1e-15 41