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Name : clpC (KRH_19150) Accession : YP_001855768.1 Strain : Kocuria rhizophila DC2201 Genome accession: NC_010617 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease ATP-binding subunit ClpC Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 2200139 - 2202757 bp Length : 2619 bp Strand : - Note : - DNA sequence : ATGTTCGAACGCTTCACCGACCGTGCCCGCCGGGTGGTCGTGCTGGCCCAGGAAGAGGCCAGGATGCTCAACCACAACTA CATCGGCACCGAGCACCTGCTGCTCGGGCTGATCCACGAGGGGGAGGGCGTCGCCGCCAAGGCCCTCGAGTCCATGGGCG TCACCCTGAGCGCCGCCCGCGAGCAGGTCCAGGACATCATCGGCCCGGGCCAGCAGGCCCCCTCGGGCCACATCCCGTTC ACGCCCCGCGCCAAGAAGGTCCTGGAGCACTCGTTGCGCGAGGCCCTGCAGCTGGGCCACAACTACATCGGCACCGAGCA CATCCTGCTGGGGATCATCCGCGCCGGTGAGGGCGTGGCCTCGCAGGTGCTCGTGAAGCTGGGCGCGGACCCCGCCAAGG TGCGTGCCACGGTGCTCGAGCTGATCTCGGGCTACCAGTCCGGCAACGCCGGGGGCGAGAAGGAGGCCGCGGGCGTCGGT TCCGGCGGTCGCGCCGAGGGGACCCCCGCCGGTTCCGCCGTGCTGGACCAGTTCGGGCGCAACCTCACCGCGGCCGCGCG CGAGTCCAAGCTGGACCCCGTGATCGGGCGCTACCGCGAGATGGAGCGCGTGATGCAGGTGCTCTCGCGGCGCACCAAGA ACAACCCGGTGCTGATCGGCGAGCCCGGTGTGGGAAAGACCGCCGTGGTCGAGGGCCTCGCGCAGGCGATCGTGCGCGGG GACGTCCCCGAGACCCTCAAGGACAAGCAGCTCTACACGCTGGACCTCGGTTCTCTCGTGGCGGGCTCCCGCTACCGCGG GGACTTCGAGGAGCGCCTGAAGAAGGTGCTCAAGGAGATCCGCACGCGCGGGGACATCATCCTGTTCATCGACGAGATCC ACACCCTGGTGGGTGCGGGTGCCGCCGAGGGCGCGATCGACGCCGCCTCGATCCTCAAGCCCATGCTGGCCCGCGGTGAG CTGCAGACCATCGGCGCCACCACCCTGGACGAGTACCGCAAGCACATCGAGAAGGACGCCGCCCTGGAGCGGCGCTTCCA GCCCATCCAGGTGGACGAGCCCTCCGAGGCCCACGCTGTGGAGATCCTCAAGGGCCTGCGGGACAAGTACGAGGCGCACC ACCGGGTGTCCATCTCGGACGAGGCCCTCGAGTCCGCCGTGAGCATGTCCGCCCGCTACGTCTCGGACCGCTTCCTGCCG GACAAGGCCATCGACCTGATCGACGAGGCCGGTGCCCGGCTGCGCATCAAGCGCATGACGGCCCCGCCGGAGATCAAGGC GCTGGACGAGAAGATCGCGGAGACCAAGACCGCCAAGGAAGCCGCGATCGACGGCCAGGACTACGAGAAGGCCGCGTCCC TGCGCGACACCGAGCAGAAGCTCATCGCCGAGCGGGACGAGAAGGACAAGGCCTGGCGCGAGGGGGACGACCAGATCTCC GAGGTCACCCCCGAGGTCATCTCGGACGTGCTCTCCGCGTCCACGGGCGTGCCCGTGTACAAGCTCTCCGAGGAGGAGTC CGGCCGGCTGCTGCACATGGAGGACGAGCTGCACAAGCGCGTCATCGGGCAGAACGAGGCCATCAAGGCCCTGTCCCGCT CCATCCGCCGCACCCGTGCGGGTCTGAAGGATCCCCGCCGTCCGGGCGGCTCGTTCATCTTCGCCGGGCCCACCGGCGTG GGCAAGACCGAGCTGGCCAAGGCGCTCGCGGAGTTCCTCTTCGGTGACGAGGACGCCCTGATCACCCTGGACATGTCCGA GTACCAGGAGAAGCACACCGTCTCCCGGCTCTTCGGTGCCCCTCCGGGCTACGTGGGCTACGAGGAGGGCGGGCAGCTGA CCGAGAAGGTCCGCCGCAAGCCGTTCTCCGTGGTGCTCTTCGACGAGGTGGAGAAGGCCCACCAGGACCTGTTCAACTCC CTGCTGCAGATCCTCGAGGACGGCCGTCTGACCGACTCGCAGGGCCGCGTGGTGGACTTCAAGAACACGGTGATCATCAT GACCACCAACCTGGGCACCCGGGACATCTCCCGCACGGTTCCCGTGGGCTTCCAGGCCAGCGGGGACGCCGCCACCTCCT ACGACCGCATGCAGGCCAAGGTGCAGGAGGAGCTCAAGGAGCACTTCCGCCCCGAGTTCCTCAACCGCGTGGACGAGATC ATCGTGTTCCCGCAGCTGAGCGAGGCCGAGATCGTGCAGATCGTGGACCTGTTCGTGGCGCGGCTGCAGCAGCGGCTGCG CGAGCAGGACATGTCCATCACGCTCACGGACGAGGCCAAGAAGCTCGTGGCCAAGAAGGGTTACGACCCCGCCATGGGCG CCCGCCCGCTGCGCCGCACCATGCAGCGCGAGATCGAGGACCAGCTCTCTGAGCGGATCCTGTTCGGTGAGATCGCCTCC GGCGAGAAGATCACCGTGGGTGTCGAGGGCGAGGGGGACGACGCCACGTTCACGTTCTCCTCGACCCCCATGTCCGAGCT GTCCGACGAGGAGATCGCGGAGATCGAGAACACTCCCACCCTCTCGGACAACGACGACAGCCAGTCCGGCAAGGACGTCC CGCGCTCACCGCACACCGGCGGTGACACGGGCGGGGGAGCGGCCCAGGCACAGGCCTGA Protein sequence : MFERFTDRARRVVVLAQEEARMLNHNYIGTEHLLLGLIHEGEGVAAKALESMGVTLSAAREQVQDIIGPGQQAPSGHIPF TPRAKKVLEHSLREALQLGHNYIGTEHILLGIIRAGEGVASQVLVKLGADPAKVRATVLELISGYQSGNAGGEKEAAGVG SGGRAEGTPAGSAVLDQFGRNLTAAARESKLDPVIGRYREMERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVRG DVPETLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGE LQTIGATTLDEYRKHIEKDAALERRFQPIQVDEPSEAHAVEILKGLRDKYEAHHRVSISDEALESAVSMSARYVSDRFLP DKAIDLIDEAGARLRIKRMTAPPEIKALDEKIAETKTAKEAAIDGQDYEKAASLRDTEQKLIAERDEKDKAWREGDDQIS EVTPEVISDVLSASTGVPVYKLSEEESGRLLHMEDELHKRVIGQNEAIKALSRSIRRTRAGLKDPRRPGGSFIFAGPTGV GKTELAKALAEFLFGDEDALITLDMSEYQEKHTVSRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEVEKAHQDLFNS LLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDISRTVPVGFQASGDAATSYDRMQAKVQEELKEHFRPEFLNRVDEI IVFPQLSEAEIVQIVDLFVARLQQRLREQDMSITLTDEAKKLVAKKGYDPAMGARPLRRTMQREIEDQLSERILFGEIAS GEKITVGVEGEGDDATFTFSSTPMSELSDEEIAEIENTPTLSDNDDSQSGKDVPRSPHTGGDTGGGAAQAQA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 69 |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 1e-97 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_001855768.1 | ATP-dependent Clp protease ATP-binding subunit ClpC | VFG0079 | Protein | 0.0 | 60 |
| clpC | YP_001855768.1 | ATP-dependent Clp protease ATP-binding subunit ClpC | VFG0080 | Protein | 1e-150 | 52 |
