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Name : secD (Bphy_2527) Accession : YP_001858745.1 Strain : Genome accession: NC_010622 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 2847790 - 2849835 bp Length : 2046 bp Strand : + Note : part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of DNA sequence : ATGAATCGTTACCCCCTCTGGAAGTATGCCGTGATGCTGGTGGCGCTCGTCATCGGCCTCGTGTACACGCTGCCCAATTT CTTCGGCGAAGCGCCGGCGGTGCAGGTGTCGAGCGGCAAGGCAACGGTGAAGCTCGATTCGACCACGCTGTCGCAGGTCG AAGCGGCGCTCGCATCCAGCCAGATCAAGCCCGACGACGTCACGTTCGACAACTCGACGCAAAACGCGAACATCCGGGTG CGTCTGAAAGACACCGACACGCAACTGCGCGTGAAGGATCTGCTGCAAAAGGCGCTCAATAGCGACCCGACCGATCCGCA GTTCATCGTGGCGCTGAACCTGCAAAGCGCGTCGCCGCACTGGCTGACCGCGCTGCACGCGCTGCCCATGTATCTCGGTC TCGACCTGCGCGGCGGCGTGCACTTCCTGCTGCAAGTCGATATGGCAGGCGCGCTCAACAAGAAACTGGATTCCGACGCA TCGGATGCGCGCACGCTGCTGCGCGACAAGGGCATCCGCGACGGTGGCGTGAACCGCGTCGGTCAATCGGTCGTCATCAA TTTCGCGGATCAGGACGTCGCGGAAACAGCGCGCAAGCAGCTGACCGCGGGCGTGTCCGAACTGCAGTGGGCGACGCAGC CGAATCCGAGCGGCGGCTTCCAGGCGGTGGGCACGTTCACCCCTGCCGTGCAAAAGACGGTGGAGGACGCGGCGCTCAAG CAGAACATCACGACGCTGCACAACCGCGTCAACGAACTCGGGGTGGCCGAACCCGTCATCCAGCAGCAAGGCTCCGACCG CATCGTCGTGGAACTGCCGGGCGTGCAGGACACGGCGAAGGCGAAGGACATCATCGGCCGTACGGCGACGCTCGAAGCAC GCCTCGCCGATCCGAACGGACTGCATCCGAATCCGTCCGACCCGGTCCCGGCGGGCGACGAACTCTTCACGCAAGGCAAC GCCGTGCCCGTGCTGCTGCGCAAGTCGGTGATCTTCACTGGCGACCGCATCATCGACGCATCGGCGGGCTTCGACGAACA CCAGCGTCCGTCCGTCAACATCCGTCTCGACTCGGCAGGCGGCCGTGCGGTACGCAGCGTGTCGCGCGACAACATCGGCA AGCCGATGGCGATGGTGCTGTTCGAAAAGGGCAAGGGCGAAGTGCTGACGGTCGCGACGATCCAGTCGGAACTAGGCGAC CGCTTCCAGATCACGGGCCAGCCGACGCCGCAAGCGGCAACCGATCTCGCACTGCTGCTGCGCGCCGGTTCGCTCGCGGC ACCGATGGACATCATCGAAGAGCGCACGATCGGCCCGAGCCTCGGCGCGGACAATATCAAGAAGGGCTTCGATTCCGTCG TGTACGGCTTCATCGCGATCGCGGCCTTCATGATCGCGTACTACATGCTGTTCGGCCTGATCTCGATGATCGCGCTGTCG GTGAACCTGCTGCTGCTCATCGCCGTCCTGTCGATGCTGCAGGCCACGCTCACCTTGCCGGGCATCGCCGCTATCGCGCT TGCGCTCGGTATGGCCATCGACGCCAACGTGCTGATCAACGAGCGCGTTCGTGAAGAACTGCGCAACGGCGCGCCGCCGC AACTGGCCATCCAGAACGGCTACGCGCATGCATGGGCGACGATTCTCGACTCGAACGTGACTACCCTGATCGCCGGTCTC GCGCTGCTCGCATTCGGCTCCGGCCCGGTGCGCGGCTTCGCGGTCGTGCACTGCATCGGCATTCTGACGTCGATGTTCTC GGCGGTGTTCTTCTCGCGCGGTCTGGTGAACCTGTGGTACGGCGGCAAGAAAAAGCTGAAGTCGCTGGCTGTCGGCCAGG TGTGGAAGCCCGCGGCAGTGGAAGGCGCAACGGCTTACCTCGACAACGCCGACGAGCAGACCGACACGGCTGCGCAGATC GCCGCAACCAAGGCGCCGAAGCAGAGGACCAAGGCTTCGGCGGGCGCGCAAGCGCGTGCGGGCAAGCCGACGCTGCGCAA CCGCAACGCGCCGGGTGGCACGAACAAGCCGGGTTCGACCCGCTGA Protein sequence : MNRYPLWKYAVMLVALVIGLVYTLPNFFGEAPAVQVSSGKATVKLDSTTLSQVEAALASSQIKPDDVTFDNSTQNANIRV RLKDTDTQLRVKDLLQKALNSDPTDPQFIVALNLQSASPHWLTALHALPMYLGLDLRGGVHFLLQVDMAGALNKKLDSDA SDARTLLRDKGIRDGGVNRVGQSVVINFADQDVAETARKQLTAGVSELQWATQPNPSGGFQAVGTFTPAVQKTVEDAALK QNITTLHNRVNELGVAEPVIQQQGSDRIVVELPGVQDTAKAKDIIGRTATLEARLADPNGLHPNPSDPVPAGDELFTQGN AVPVLLRKSVIFTGDRIIDASAGFDEHQRPSVNIRLDSAGGRAVRSVSRDNIGKPMAMVLFEKGKGEVLTVATIQSELGD RFQITGQPTPQAATDLALLLRAGSLAAPMDIIEERTIGPSLGADNIKKGFDSVVYGFIAIAAFMIAYYMLFGLISMIALS VNLLLLIAVLSMLQATLTLPGIAAIALALGMAIDANVLINERVREELRNGAPPQLAIQNGYAHAWATILDSNVTTLIAGL ALLAFGSGPVRGFAVVHCIGILTSMFSAVFFSRGLVNLWYGGKKKLKSLAVGQVWKPAAVEGATAYLDNADEQTDTAAQI AATKAPKQRTKASAGAQARAGKPTLRNRNAPGGTNKPGSTR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 6e-90 | 43 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 6e-90 | 43 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 3e-90 | 43 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 6e-90 | 43 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 6e-90 | 43 |
