Gene Information

Name : Bphy_2934 (Bphy_2934)
Accession : YP_001859151.1
Strain :
Genome accession: NC_010622
Putative virulence/resistance : Virulence
Product : FliI/YscN family ATPase
Function : -
COG functional category : N : Cell motility
COG ID : COG1157
EC number : 3.6.3.15
Position : 3290226 - 3291869 bp
Length : 1644 bp
Strand : +
Note : KEGG: bxe:Bxe_A0163 ATPase FliI/YscN; TIGRFAM: ATPase, FliI/YscN family; flagellar protein export ATPase FliI; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; SMART: AAA ATPase

DNA sequence :
ATGGTAAAGCCGACCATCGAAGACATTCAGCATAGCGACCTCACGCCGCTCGAACGCGAGCTGGCGCTGGCGTCGTTCGG
CGCGGAAGCGCTCACCGTCGCACAGATGGAAGAGTCGCTCGCGGCGCTGGAATCCGCGATTTCGGAAGCCCATGCGGGCG
CCAGCGACGAGCGTTCGCACGAAAAGCCTGCGAGCGCGCCGCATCCCGAAGCGGCGCCCGCGAGCCGCGACTCGGCGCCC
CCGCCGAAGCGCGCACCCGATCCCGCACTGCTCGACAACCCGCATTTGCAGGCATGGCGCAACCGCCTCACGAGCCTGCG
CGAACGCAACCAGATCGCGCGCCCGCTGCGCGCGTGCGGCCGCCTGACGCGTGCGGCCGGTCTCGTGCTTGAAGCCGTCG
GGCTGCGTCTCGCCGTCGGCTCCGAAGTGATGATCGAGCTGCCGCCCGGCAGCACGCGCACGATGGCGGAAGCCGAAGTG
GTCGGCTTTCACGGCGACAAGCTCTTTCTGATGCCGACGACGGAAGTCGCCGGTCTCCTGCCCGGCGCGCGTGTCTATCC
GCTGGAGACGGCGCCCATCGCCGATCCGATGGCGGGCGCGAAGCGTCTGCCCGTCGGCTGGGAACTGCTCGGCCGCGTGG
TCGATGCATCGGGCAAGCCGCTCGACGGCTTCGGCCCGCTCAATTCGCGCAACGACGCGCCGCTCACTGCGCCGACCATC
AACCCGCTGCATCGCGAGCCGATTCACAAGGTGCTCGACGTCGGCGTGCGCGCGATCAACTCGCTGCTCACCGTCGGACG
CGGTCAGCGCATGGGTCTGTTCGCGGGATCGGGCGTCGGTAAATCGGTGCTGCTCGGCACGATGGCGCGCTATACGAGCG
CCGAAGTGATCGTGATCGGGCTGATAGGCGAGCGCGGCCGCGAAGTGAAGGAATTCATCGAACAGATTCTCGGCGAGGAA
GGTCTCGCGCGCTCGGTCGTGGTGGCCGCGCCCGCCGACGTGTCGCCGCTGCTGCGGATGCAGGGCGCCGCCTACGCGAC
GTCGCTCGCCGAATATTTCCGCGATCAGGGCAAGCACGTGCTGCTGCTGATGGACTCGCTCACGCGCTACGCGATGGCGC
AGCGCGAGATCGCGCTCGCGATCGGCGAGCCGCCCGCGACCAAGGGCTATCCGCCTTCCGTGTTCGCGAAGCTGCCTGCC
CTCGTCGAGCGCACGGGCAACGGCCCCGAAGGCGGCGGCTCGATCACTGCGTTCTATACGGTGCTGACGGAAGGCGACGA
CCAGCAGGACCCGATCGCAGACTCGGCGCGCGCCATTCTCGACGGCCATATCGTGCTGTCGCGCGCGCTCGCCGAAGCGG
GCCACTACCCCGCCATCGACATCGAAGCGTCGATCAGCCGCGCGATGACGGCGCTTATCAGCGACGCTCATCTGGATCGC
ACGCGCCAGTTCAAGCAGATGCTGTCGCGCTATCAGCGCAACCGCGACCTGATCAACGTCGGCGCGTATTCGGCGGGACG
CGACGCGGTGCTCGACAAGGCGATCGCGTTGTATCCGCGCATGGAAGCATTCCTGCAGCAAGGTTTTCGCGAAAGCGCCG
GGTTCGAAGCCAGCGTGGCGCACCTCGACTCGTTGTTCGGCTAG

Protein sequence :
MVKPTIEDIQHSDLTPLERELALASFGAEALTVAQMEESLAALESAISEAHAGASDERSHEKPASAPHPEAAPASRDSAP
PPKRAPDPALLDNPHLQAWRNRLTSLRERNQIARPLRACGRLTRAAGLVLEAVGLRLAVGSEVMIELPPGSTRTMAEAEV
VGFHGDKLFLMPTTEVAGLLPGARVYPLETAPIADPMAGAKRLPVGWELLGRVVDASGKPLDGFGPLNSRNDAPLTAPTI
NPLHREPIHKVLDVGVRAINSLLTVGRGQRMGLFAGSGVGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEE
GLARSVVVAAPADVSPLLRMQGAAYATSLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPA
LVERTGNGPEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRALAEAGHYPAIDIEASISRAMTALISDAHLDR
TRQFKQMLSRYQRNRDLINVGAYSAGRDAVLDKAIALYPRMEAFLQQGFRESAGFEASVAHLDSLFG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 6e-78 49
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 3e-77 47
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-75 47
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-76 47
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 1e-75 47
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 1e-65 47
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 6e-66 47
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 6e-66 47
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 1e-65 47
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 4e-66 47
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 3e-75 46
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 3e-75 46
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 4e-77 46
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 3e-77 46
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 3e-77 46
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 5e-63 46
unnamed AAL06369.1 EscN Virulence LEE Protein 1e-71 46
lscN AAO18044.1 LscN Virulence TTSS locus Protein 1e-72 45
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 3e-69 45
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 3e-69 45
escN CAI43874.1 EscN protein Virulence LEE Protein 2e-71 45
escN AAC38383.1 EscN Virulence LEE Protein 4e-71 45
escN AAK26715.1 EscN Virulence LEE Protein 3e-71 45
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 3e-71 45
escN AAL57542.1 EscN Virulence LEE Protein 3e-71 45
escN YP_003223475.1 translocator EscN Virulence LEE Protein 2e-71 45
escN CAC81862.1 EscN protein Virulence LEE II Protein 3e-71 45
escN AAC31513.1 L0034 Virulence LEE Protein 3e-71 45
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 3e-71 45
escN NP_290268.1 hypothetical protein Virulence LEE Protein 4e-71 45
ECs4568 NP_312595.1 EscN Virulence LEE Protein 4e-71 45
escN YP_003236088.1 translocator EscN Virulence LEE Protein 2e-71 45
hrpJ4 AAA81942.1 HrpJ4 Virulence Hrp PAI Protein 7e-58 44
hrcN ABQ88354.1 HrcN Virulence Hrp PAI Protein 7e-58 44
hrcN AAR25633.1 type III secretion cytoplasmic ATPase HrcN Not tested Not named Protein 1e-62 43
hrcN AAT96141.1 HrcN Virulence T-PAI Protein 6e-64 42
hrcN AAT96195.1 HrcN Virulence T-PAI Protein 6e-64 42
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 9e-63 42
hrcN AAB06001.1 HrcN Virulence Hrp PAI Protein 6e-63 42
hrcN AAT96299.1 HrcN Virulence S-PAI Protein 2e-64 41
hrcN AAT96258.1 HrcN Virulence S-PAI Protein 1e-64 41
hrcN ABA47275.1 HrcN Virulence S-PAI Protein 2e-66 41
invC AAS66861.1 InvC Not tested SSR-2 Protein 1e-56 41
ECs3730 NP_311757.1 ATP synthase SpaL Not tested LIM Protein 4e-55 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bphy_2934 YP_001859151.1 FliI/YscN family ATPase VFG2499 Protein 0.0 86
Bphy_2934 YP_001859151.1 FliI/YscN family ATPase VFG2331 Protein 4e-140 71
Bphy_2934 YP_001859151.1 FliI/YscN family ATPase VFG1254 Protein 4e-120 64
Bphy_2934 YP_001859151.1 FliI/YscN family ATPase VFG0515 Protein 6e-66 47
Bphy_2934 YP_001859151.1 FliI/YscN family ATPase VFG2144 Protein 4e-77 46
Bphy_2934 YP_001859151.1 FliI/YscN family ATPase VFG0048 Protein 5e-77 46
Bphy_2934 YP_001859151.1 FliI/YscN family ATPase VFG0192 Protein 1e-78 45
Bphy_2934 YP_001859151.1 FliI/YscN family ATPase VFG0390 Protein 3e-74 45
Bphy_2934 YP_001859151.1 FliI/YscN family ATPase VFG0730 Protein 2e-71 45
Bphy_2934 YP_001859151.1 FliI/YscN family ATPase VFG0812 Protein 1e-71 45
Bphy_2934 YP_001859151.1 FliI/YscN family ATPase VFG2459 Protein 8e-61 42
Bphy_2934 YP_001859151.1 FliI/YscN family ATPase VFG1008 Protein 3e-61 41