Gene Information

Name : Bphy_6115 (Bphy_6115)
Accession : YP_001862218.1
Strain :
Genome accession: NC_010625
Putative virulence/resistance : Virulence
Product : type VI secretion ATPase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 665804 - 668524 bp
Length : 2721 bp
Strand : -
Note : KEGG: bxe:Bxe_A2096 putative ClpA/B-type chaperone, ATPase subunit ClpB, heat shock protein; TIGRFAM: type VI secretion ATPase, ClpV1 family; PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities A

DNA sequence :
ATGACGATTTCCCGTCAGTCCCTGTTCAGCAAGCTGGGAGTCACGTTGTTCAGGAGTGCTGAATCTGCAACGGCGTACTG
TAAACTCAGAGGCAATCCCTACGTCGAGCTGGTGCACTGGTTGCACCAGCTTATGCAGCAGCCTGATTCTGACCTGCATC
GTGTGCTGCGTCATTGTGAAATTGATCAGGACACGCTGGATCGTGACATGGCCCGTGCACTTGCGGGGTTGCCGGCAGGT
GCCAGTTCCATTATCGATTTTTCGCACGATGTCGATCACGCCATCGAGCGTGGCTGGCTCATCACATCGCTCGACAGGAA
TGAACGGCGTATTCGCGGCGCCTGGTTGCTGGTCGCCCTTCTGACGACGCCCGAACTGCGGCGTGCGCTGCTTTCCATTT
CACCGGCCTTCGCCAAGATTCCCGTAGACGGATTGAGCGATGTGCTGCCGGCGTGGATTGATGGTTCGCCCGAAATGGGC
GAAGCCCCGCACGATAGCAGCGACTACTCCCCCGCCCTTCCCGGCGAAGCCTCCCAGGCCATGCCGCGTACTTCAAAAGG
CTCGCCACTTGAACAGTACTGCACCGACCTGACGGCACGCGCACGTGCTGGCGAGATCGACCCCGTGGTGGGGCGCGAAC
TCGAGATCCGCACGATGATCGATGTGCTGCTGCGTCGCCGCCAGAACAACCCGCTGCTCACGGGTGAAGCCGGCGTTGGC
AAAACCGCTGTTGTAGAAGGGTTCGCACTCGCAGTCGCCAACGGTGAAGTCCCCCCCAAACTCGCCAGTGTGCGCTTGCT
GAGCCTCGACGTCGGTGCCCTCCTTGCCGGCGCCAGCATGAAGGGCGAATTCGAGGCGCGCCTGAAAGGCGTGCTTGAAG
CTGCCGCAAAGTCGCAGGTTTCGGTGATTCTTTTCGTGGATGAAATCCATACGCTGATCGGTGCAGGTGGTCAGGCAGGC
ACGGGCGACGCCGCCAACCTCCTCAAGCCGGCGCTCGCACGCGGTACGATTCGCACCATCGGCGCGACAACGTGGGCCGA
GTACAAGCGGCACATTGAGAAGGATCCTGCGCTCACCCGCCGCTTCCAGGTCCTTCAGGTTCCGGAGCCGGAGGAAGTGG
CCGCCATCGACATGGTGCGCGGTCTCGCGCCAACGTTTGCCCGGCATCATGGTGTCGTCATTCTCGACGAAGCGATTCGT
GCCGCGGTGAGGTTTTCGCATCGCTACATTCCCTCGCGGCAGTTGCCCGACAAGGCGATCAGCCTGTTCGATACGGCCTG
CGCCCGCGTGGCGCTCTCGCAGCATACGCCACCGCGCGAACTGCAAAACCTGTCCGAGCGTCTGCGTGCGGCCACGGTCG
AGCGCGACCTGCTCCAGCAGGAAGCGCTCATCGGTCTGGATGCGGATCAGGCCATCGCCTCTGCGAACGCGCGCATCGAA
GCCCTGACAAACGACATGGCCGTTGTCGAAGGACACTGGCGCGCCCAGCTCGACGCCATGCAGGCGCTTGCGAGCGCGCG
TGAGGCAGCGCTCGCCGGCGATCAGCAGGCAGCAGGTTCCTTGCGTGATCTTGAGCAACAGCTCACATTCCTCCGGGGCG
AGACGCCTTATGTATTCCCGGAAGTCGATGAAGCCATTGTCGCGGAAATCGTGTCGGACTGGACCGGCGTCCCCGTCGGG
CGCATGGTGACTGACGAGATCACGGCCGTTCGCACACTGCCCTCAACGCTCGAAGCGAGGGTCATCGGCCAACCCGATGC
GCTCCACCAGATCGGCGAGCGCGTGCAGACGGCGCGTGCCGGCCTCACGAACCCGAAGAAGCCCCTTGGCGTGTTCCTGC
TCGCGGGCCCTTCCGGTGTCGGCAAGACCGAGACGGCGCTCGCCCTTGCTGAAGCGCTGTATGGCGGCGAGCAGAACCTG
ATCACCCTCAACATGAGCGAGTATCAGGAAGCTCACACGGTCTCGGGGCTCAAGGGCGCGCCACCGGGTTACGTCGGTTA
CGGCGAGGGCGGCGTACTGACCGAAGCCGTGCGACGCCGCCCGTATTCGGTGGTGCTGCTCGACGAGATCGAGAAGGCGC
ATCGCGACGTCCACGAAATGTTCTTCCAGGTGTTCGACAAGGGCTACATGGAAGATGGTGACGGGCGGTATATCGACTTC
CGCAATACCACGATCCTGCTTACCAGCAACGTGGGCTCGGAGCTGACGGCAAGCCTGTGTGCGGACCCGGCGCTTGCACC
GGATACAGAGGCCTTGCGTGCTGCGCTCGCCCCCGAACTGCTCAAGGTGTTCCCGGCCGCATTCCTTGGTCGCATCACCG
TCGTGCCATACCGGCCGCTCGCCAGCATGTCACTCGCGCGCATCGTCAGGCTGCACCTGGAGCGCGTCGTGCGCCGCATG
GCCGAGACACACCAGATCGTACTGAACTACGAGGAGGCTGTCGTCGATTACATCGTCGGTCGATGTCTCGTGCAGGAGAC
GGGTGCACGTGTGCTGATCGGCTTCATCGAGCAGCACGTCCTGCCGCGTCTTTCTACCCTGTGGCTCGATGCCTTTTCGT
CGAAGCAGCCGCTCTCACGCATCGATATTGTCCTGGGCGATCGTGACGCTCCGCCTGCTACCGCGCTGCTGTTCCGGTTC
CCGGCTGCGCAGCAGCAGGCCAGCCAGACCGATGGCGTCAACGCTGACGCCGAGGAATCCATCGTCGGGCAGGCTCTCTG
A

Protein sequence :
MTISRQSLFSKLGVTLFRSAESATAYCKLRGNPYVELVHWLHQLMQQPDSDLHRVLRHCEIDQDTLDRDMARALAGLPAG
ASSIIDFSHDVDHAIERGWLITSLDRNERRIRGAWLLVALLTTPELRRALLSISPAFAKIPVDGLSDVLPAWIDGSPEMG
EAPHDSSDYSPALPGEASQAMPRTSKGSPLEQYCTDLTARARAGEIDPVVGRELEIRTMIDVLLRRRQNNPLLTGEAGVG
KTAVVEGFALAVANGEVPPKLASVRLLSLDVGALLAGASMKGEFEARLKGVLEAAAKSQVSVILFVDEIHTLIGAGGQAG
TGDAANLLKPALARGTIRTIGATTWAEYKRHIEKDPALTRRFQVLQVPEPEEVAAIDMVRGLAPTFARHHGVVILDEAIR
AAVRFSHRYIPSRQLPDKAISLFDTACARVALSQHTPPRELQNLSERLRAATVERDLLQQEALIGLDADQAIASANARIE
ALTNDMAVVEGHWRAQLDAMQALASAREAALAGDQQAAGSLRDLEQQLTFLRGETPYVFPEVDEAIVAEIVSDWTGVPVG
RMVTDEITAVRTLPSTLEARVIGQPDALHQIGERVQTARAGLTNPKKPLGVFLLAGPSGVGKTETALALAEALYGGEQNL
ITLNMSEYQEAHTVSGLKGAPPGYVGYGEGGVLTEAVRRRPYSVVLLDEIEKAHRDVHEMFFQVFDKGYMEDGDGRYIDF
RNTTILLTSNVGSELTASLCADPALAPDTEALRAALAPELLKVFPAAFLGRITVVPYRPLASMSLARIVRLHLERVVRRM
AETHQIVLNYEEAVVDYIVGRCLVQETGARVLIGFIEQHVLPRLSTLWLDAFSSKQPLSRIDIVLGDRDAPPATALLFRF
PAAQQQASQTDGVNADAEESIVGQAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 0.0 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bphy_6115 YP_001862218.1 type VI secretion ATPase VFG2076 Protein 0.0 54
Bphy_6115 YP_001862218.1 type VI secretion ATPase VFG2084 Protein 5e-125 41
Bphy_6115 YP_001862218.1 type VI secretion ATPase VFG0079 Protein 2e-92 41