Gene Information

Name : Npun_F5890 (Npun_F5890)
Accession : YP_001869129.1
Strain : Nostoc punctiforme PCC 73102
Genome accession: NC_010628
Putative virulence/resistance : Virulence
Product : cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG2274
EC number : 3.6.3.27
Position : 7275675 - 7278620 bp
Length : 2946 bp
Strand : +
Note : KEGG: ana:all7315 ABC transporter ATP-binding protein, hemolysin secretion protein; TIGRFAM: type I secretion system ATPase; PFAM: cyclic nucleotide-binding; ABC transporter transmembrane region; ABC transporter related; peptidase C39, bacteriocin process

DNA sequence :
ATGATGACAAATACAACCGTTGATATTCAAGAATTTATTGCTGATTTGTTTCCTTTCAATTATCTGTCACCAAATGTTTT
AGAAAATTTGCTCAACAAAGTGCAATTTTGTCGCTATCGCATCGGGCAAGTAATAGTAGCACGGGAAGCTATGCCCGATC
GGATTAGTATTATCTACCAGGGACAAGCGCGTTTATTAGCCTACAATTCCCAAGGACAAAATCCGGCGACACTGAAGTTG
CTCTCATCAGGTGAGGTTTTGGGTTGGGTAAGTCATGTGCGGGGGATTGCTTGTGAAACTGCGATCGCTTCTACTGAAGT
TATCACCTTTAATCTGGCGATCGCTGATTTTCTCGCATTGATTCAACAGGAGAAGGCTTTTGCCGAAGCATTACATAATA
CTGCTTCCCTCATAGAAGTATATGAACTGCTGATGGAAGAACTGAATCGTCGGGCAGATGGTAGCAGGAATTTAGTTAAG
CTTGCTCGCACAGCAACTCAAGCAGCCGTTATTCAAACATTCCCAACACGTAAAATATCTCTCCAGCAGTTAGATTCAGA
ATTATTGTGGTTAGTTAGCAGTAGTTCGAGTGCTTACTTTCCTGTAGGGAGTCGCTTAAAGTTAGATGATATCAACCCCA
AGCTGAAATTTAACGCAAGTATGCGTCTGGTGGGCTTACCTAAATCAATACTTGGAGAAAATCTTGCTCCTCCTACGTCA
AAAACACTGTTACCCGCAGAGATTCCCTACGCTTCAGAAATTACTGTCACAGAAGAACCAGCAGCTAAGGGTAAACAAAA
GAAGTTTCCTTATATCAAAGGTAGAGGACCACTAGATGGTTCATTAGCTTGCTTCCAAATGTTGAGCCAATACTTTAACA
TCTCCTGGCGCAAAGATACACTACGCCGGGTGTTGACAAAGCAGCAAGAACAGAAGGGCACTATATCTCTGCAATTTTGC
GCCGCCGCCGCTGAGTTGATGGGGTTGACAACACAGATGGTTAAAGTTCCCGCTACCGCAGTCGGACGCTTGCAGTTACC
AGTAATGATTTCTTGGCAAGATAGTTTTGCCATCATCTACAAAAATAGCGATCGAGAGTTACTCATTGCTGTTCCAGAGA
TGGGACTACTGCGCTACAAATTACGAGACTTTGCGGAAAACTGGGGGGCTGAAGGAGAAGTTCTGCTGCTACAAACCACC
AAAAATACTCCCAAGGCGCGGTTTAGTTTAAGTTGGTTTGTACCTTCACTGCGACGCTACCGCAAAGTATTAATTGAAGT
ACTAATTGCTTCCATTGTTATCCAACTGTTTGGGCTGGTAAATCCTCTGGCTACACAGGTGATTATTGATAAAGTATTGG
TTGGCAATAGTCCTGATACCCTGGAAGTTTTCGGCATCTTTTTGCTGGTAGTTGCAGTCATCGAAGCAATACTTACCAGC
GTTCGCACTCATTTATTTACAGATACCACCAACCGGATTGACCTCACCCTTGGTTCTGAGGTGATTAATCACTTGTTGCG
TTTGCCTTTATCTTACTTTGAACGCCGCCCTGTGGGGGAATTGGCAACGCGAATCCACGAATTAGAAAACATCCGCTCTT
TTTTAACTGGTACCGCTTTAACTGTAGTGATGGATGCTGTGTTTTCGGTGGTCTACATCGTAGTAATGGCGATTTACAGC
CCAGTGTTGACATTAGTTGCTTTGGCAACAGTACCGCTATTTGGCTTGCTCAACTTGATGGTATCACCTTTGATGCGGCG
ACAATTGCAAGAGAAAGCTGAGTGCAATGCCGAGACGCAATCTTATTTAGTGGAAGTCATGGGGGGAATGCAGACAATCA
AGGCGCAAAATTTAGAAATGCGATCGCGTTGGCAATGGCAAGAACGCTATGCTCGTTACATCAGCGCTGGTTTCAAAACA
GTCTCTACCCAAACTACCGCCAGTTCTATTAGCAGTTTTCTCAACAAGTTTTCCAGCATGTTAGTACTGTGGGTGGGAGC
TTTTCTCGTCCTAAATCAGCACCTTACCTTGGGACAACTCATCGCCTTTCGCATTCTTGCTGGTTATGTCACCAGTCCCT
TGTTACGCCTGATGCAACTTTGGCAGAACTTCCAAGAAACCGCTCTATCTCTGCAACGCCTTGCTGATATTTTAGACACT
CCCCAAGAAACAGAAATCGGCAACTCTCAAAATATTCTCATGCCCAGTATTCAAGGTAGTGTCCGCTTTGAAAATCTCAG
CTTCAGTTTCTCGGAAAACGGACCGATGCAACTGTGCAATATTAACTTAGACTTTCCGGCTGGCTCCTTTGTGGGAATTG
TTGGTCAAAGCGGTTCCGGTAAAAGCACTCTGCTAAAATTGTTGCCTCGGCTTTATGAACCAAAGTCCGGCAAAATCTTG
ATTGATGGCTATGATATCAGCAAAGTAGAACTTTATTCTTTACGTCGTCAAATTGGTATGGTGTTACAAGATACCCTCTT
GTTTGATGGCACAATTCGCGAAAACATTTCCTTGGGATATCCTGATGCTAGCGATGAAGAAATTATTACTGCTGCCAAGG
TAGCATTCGCCCACGACTTTATTATGTCTTTACCCAGTGGCTATAACACCCGCGTCGGCGAACGAGGTTCGGGACTGTCT
GGGGGACAACGCCAAAGAGTCGCGATCGCTCGTACTGTTCTGCAAAATCCCCAATTACTGATTCTTGATGAAGCAACCAG
TGCCTTAGATTACAATGCCGAAGCCCAAGTTTGCGGTAACTTAGCGAGAACTTTCCAAGATAAAACAGTATTTTTCATTA
CTCACCGCCTCAGCACAATTCGCAATGCCGATGTAATTCTCATGATGGATCGAGGCGCTGTAGTAGAACAGGGAACTCAT
GAAGAATTGATGGCGCTCAAAGGTTATTACTACTGTCTGTATCAGCAACAGGAAGCGAAAGTGTAG

Protein sequence :
MMTNTTVDIQEFIADLFPFNYLSPNVLENLLNKVQFCRYRIGQVIVAREAMPDRISIIYQGQARLLAYNSQGQNPATLKL
LSSGEVLGWVSHVRGIACETAIASTEVITFNLAIADFLALIQQEKAFAEALHNTASLIEVYELLMEELNRRADGSRNLVK
LARTATQAAVIQTFPTRKISLQQLDSELLWLVSSSSSAYFPVGSRLKLDDINPKLKFNASMRLVGLPKSILGENLAPPTS
KTLLPAEIPYASEITVTEEPAAKGKQKKFPYIKGRGPLDGSLACFQMLSQYFNISWRKDTLRRVLTKQQEQKGTISLQFC
AAAAELMGLTTQMVKVPATAVGRLQLPVMISWQDSFAIIYKNSDRELLIAVPEMGLLRYKLRDFAENWGAEGEVLLLQTT
KNTPKARFSLSWFVPSLRRYRKVLIEVLIASIVIQLFGLVNPLATQVIIDKVLVGNSPDTLEVFGIFLLVVAVIEAILTS
VRTHLFTDTTNRIDLTLGSEVINHLLRLPLSYFERRPVGELATRIHELENIRSFLTGTALTVVMDAVFSVVYIVVMAIYS
PVLTLVALATVPLFGLLNLMVSPLMRRQLQEKAECNAETQSYLVEVMGGMQTIKAQNLEMRSRWQWQERYARYISAGFKT
VSTQTTASSISSFLNKFSSMLVLWVGAFLVLNQHLTLGQLIAFRILAGYVTSPLLRLMQLWQNFQETALSLQRLADILDT
PQETEIGNSQNILMPSIQGSVRFENLSFSFSENGPMQLCNINLDFPAGSFVGIVGQSGSGKSTLLKLLPRLYEPKSGKIL
IDGYDISKVELYSLRRQIGMVLQDTLLFDGTIRENISLGYPDASDEEIITAAKVAFAHDFIMSLPSGYNTRVGERGSGLS
GGQRQRVAIARTVLQNPQLLILDEATSALDYNAEAQVCGNLARTFQDKTVFFITHRLSTIRNADVILMMDRGAVVEQGTH
EELMALKGYYYCLYQQQEAKV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hlyB NP_755448.1 hemolysin B Virulence PAI I CFT073 Protein 2e-108 42
hlyB CAD33760.1 hemolysin B Virulence PAI I 536 Protein 2e-108 42
hlyB CAD42038.1 HlyB protein Virulence PAI II 536 Protein 2e-108 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Npun_F5890 YP_001869129.1 cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter VFG0841 Protein 3e-106 43
Npun_F5890 YP_001869129.1 cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter VFG1557 Protein 1e-108 42
Npun_F5890 YP_001869129.1 cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter VFG1501 Protein 1e-108 42
Npun_F5890 YP_001869129.1 cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter VFG0907 Protein 1e-108 42
Npun_F5890 YP_001869129.1 cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter VFG1269 Protein 5e-119 42