Gene Information

Name : YPTS_1492 (YPTS_1492)
Accession : YP_001871921.1
Strain : Yersinia pseudotuberculosis PB1/+
Genome accession: NC_010634
Putative virulence/resistance : Unknown
Product : cold-shock DNA-binding domain-containing protein
Function : -
COG functional category : K : Transcription
COG ID : COG1278
EC number : -
Position : 1656922 - 1657185 bp
Length : 264 bp
Strand : -
Note : KEGG: ypi:YpsIP31758_2609 cold shock domain protein CspD; TIGRFAM: cold shock domain protein CspD; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein

DNA sequence :
ATGGAGACGGGTACTGTTAAATGGTTCAACAACGCCAAAGGTTTTGGCTTTATTTGCCCTGAGGGCGGTGGCGAAGACAT
TTTCGCTCACTATTCAACTATCCAGATGGATGGTTACCGAACATTAAAAGCCGGCCAAATAGTTAACTTTGATGTTCATG
AAGGCCCCAAAGGGAACCATGCTAGCCTGATTGTTCCGCTAGAGTTAAATAGTGTACCACCGTTAGACGGTGTATCACCG
CCGGAACTCGCTATACTGGCCTGA

Protein sequence :
METGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQIVNFDVHEGPKGNHASLIVPLELNSVPPLDGVSP
PELAILA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 4e-15 53