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Name : YPTS_2239 (YPTS_2239) Accession : YP_001872657.1 Strain : Yersinia pseudotuberculosis PB1/+ Genome accession: NC_010634 Putative virulence/resistance : Virulence Product : type I secretion system ATPase Function : - COG functional category : V : Defense mechanisms COG ID : COG2274 EC number : - Position : 2465281 - 2467428 bp Length : 2148 bp Strand : + Note : KEGG: yps:YPTB2169 putative ABC RTX toxin transporter, fused ATP binding/permease domains; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase DNA sequence : ATGGAAAATCATGTTCATTCCGCGCTGATATGTGCATCCAGATTGATTCGGTTGGCCGGGTTAAATCCAATGGATATCGA GACATTTAGCCAAAAGGTCGCCATAGACACCTCAGTAAAAACAACGCTAGCGTCTCTTCAGCGTTATATCGTTCAATTTT CACAAACAGCTTCTGTCCGTTTTAAAATACGTAAGCAAGCATTGGAAAAAATAAGGCAGGAGCAGTTACCGCTGGCATTT CGTGACCGTCAGGGGAATTTTATCTTGCTGGCGCGGATGAATGAACAACAAGTGTTATTACAGTACGCTGATGATAAAAA ACCACAAATGTTAAGTTATCAATCACTTGCTGACATGTGGGGTGGAATGATCTTATGCTGTAGTCATTCGCGCTTTGATA TTCGCTGGTTTATCCCGCCACTACGTCGCCATCGTAAGCCATTAATGCAAGTCCTATTGTTATCATTATTGCTGCAATTC CTAGCGTTGATCTCCCCTCTCTTTTTTCAAGTTATCATGGACAAAGTACTCGTTCATCATGCATTAACCACACTGGAAGT GCTAATCTTCATCTTAGTCATTGTCGGTGTGTATGAGGTTATATTAAAAGGCTTGCGAGAATATATTTTTACGCATACGA CAACACGAGTGGATATATTATTAGGCGGGAAGTTGTTTCAACATTTAATCAGGTTGCCGTTAAGTTACTTTAAACAACGT CATGTCGGTAATATTGTTGCCAGAGTCCGTGAGTTAGATAATATCCGTGATTTCATCACGGGTTCGGCCCTGACATTATG TGTTGATGTGGTTTTTACCTTCGTGTTGTTTATTGTTATGTGGTGTATATCCCCGTTATTAACCTTAATAATACTGAGCA CGTTGCCTTTTTATCTGTTATTGGCCGTGATGACCACTCGGCCGTTGCAAAAAAAAGTGGAGGCTCTCTGTGGTTTTGCT GCGCAAAACGGCGCGTTTTTGACTGAAACGGTGTCTGGGGTGGAAACCGTAAAAAGTTTGGCGCTGGAGCCACGGATGCG CCAGCGCTGGGAAAGCCAAACTCGTGATTTTGCTCAGGCTAATTTTCAGGTACAAAATTTGCAAAATCTCAGTAGCCAAG CGGCTCAACTCTTGCAAAAGGTGGCTGGCGCACTGGTGATCGTGATAGGTGCGTATCACGTTATGTTTGTACAGCTCAGT ATTGGTCAGTTGATTGCATTTAATATGTTGGCACTACAGGCATTAATGCCGATGAGTAAACTGGTTGATTTATGGCAGCA GAGCATCCGTGCGCAGGTTGGGCTGAAATTAATATCAGATATTCTAAGCTTGCCGGTTGAACCGGAGGCAGATCCGGCGG CCCCGCACCCTGCGATTAGCGGCAATATCCTACTAAAAAATGTGGCCTTCCGTTATCGCCCCGATCTTGATCCTGTCTTA CATGATTTAAACTTATCTATCCGCGCGGGTGAACATATCGGGTTGGTGGGGCCGTCAGGATCGGGGAAAAGCACCGTGGC CCGGTTATTACAACGGCTCTATAACACCGAACAAGGGGTCATTACGATAGATGGTTATCCGATCAACCATTTATCACCAG AATATTTACGGCGACAAGTGGGGGTGGTGATGCAGGAAAGCTATCTGTTTAACCGCACCGTGCGAGAAAATATTGCCCAT TCACGGCCAACAGCCACCTTGACCGAGGTGGTCAATGCCGCCAGTTTAGCGGGTGCTAACGCCTTTATTTTGGCGCTACC TTTAGGGTATGACACGGTTTTATCTGAAGGTGGTTCATCCTTATCTGGTGGGCAACGTCAACGTATTGCCATTGCTCGCA CTCTGCTCGCGAATCCCCGGATCTTAATTTTTGATGAAGCGACCAGCGCACTGGATGATGAGTCTCAGTCGGAGATTCAG AAAAACATGGCCCGCATTATCGCCAATCGCACGGTTATTACGATTGCCCATCGCCTATCGACCGTTCGTCACTGCCACCG TATTGCCGTGATAACACAAGGCCGAGTCACCGAACTTGCCAGCCATGACGAATTACTGCAATTAAACGGCAGTTACGCTC GGCTTTGGCAACAACAAGTTCATTTTAACCAAAACAAGTCCACCTTAACTAAAACAAGTCCACCTTAA Protein sequence : MENHVHSALICASRLIRLAGLNPMDIETFSQKVAIDTSVKTTLASLQRYIVQFSQTASVRFKIRKQALEKIRQEQLPLAF RDRQGNFILLARMNEQQVLLQYADDKKPQMLSYQSLADMWGGMILCCSHSRFDIRWFIPPLRRHRKPLMQVLLLSLLLQF LALISPLFFQVIMDKVLVHHALTTLEVLIFILVIVGVYEVILKGLREYIFTHTTTRVDILLGGKLFQHLIRLPLSYFKQR HVGNIVARVRELDNIRDFITGSALTLCVDVVFTFVLFIVMWCISPLLTLIILSTLPFYLLLAVMTTRPLQKKVEALCGFA AQNGAFLTETVSGVETVKSLALEPRMRQRWESQTRDFAQANFQVQNLQNLSSQAAQLLQKVAGALVIVIGAYHVMFVQLS IGQLIAFNMLALQALMPMSKLVDLWQQSIRAQVGLKLISDILSLPVEPEADPAAPHPAISGNILLKNVAFRYRPDLDPVL HDLNLSIRAGEHIGLVGPSGSGKSTVARLLQRLYNTEQGVITIDGYPINHLSPEYLRRQVGVVMQESYLFNRTVRENIAH SRPTATLTEVVNAASLAGANAFILALPLGYDTVLSEGGSSLSGGQRQRIAIARTLLANPRILIFDEATSALDDESQSEIQ KNMARIIANRTVITIAHRLSTVRHCHRIAVITQGRVTELASHDELLQLNGSYARLWQQQVHFNQNKSTLTKTSPP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hlyB | CAD33760.1 | hemolysin B | Virulence | PAI I 536 | Protein | 7e-108 | 45 |
| hlyB | CAD42038.1 | HlyB protein | Virulence | PAI II 536 | Protein | 7e-108 | 45 |
| hlyB | NP_755448.1 | hemolysin B | Virulence | PAI I CFT073 | Protein | 9e-108 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| YPTS_2239 | YP_001872657.1 | type I secretion system ATPase | VFG0841 | Protein | 2e-101 | 46 |
| YPTS_2239 | YP_001872657.1 | type I secretion system ATPase | VFG1269 | Protein | 8e-111 | 45 |
| YPTS_2239 | YP_001872657.1 | type I secretion system ATPase | VFG1501 | Protein | 4e-108 | 45 |
| YPTS_2239 | YP_001872657.1 | type I secretion system ATPase | VFG0907 | Protein | 4e-108 | 45 |
| YPTS_2239 | YP_001872657.1 | type I secretion system ATPase | VFG1557 | Protein | 4e-108 | 45 |
