|
Name : YPTS_2241 (YPTS_2241) Accession : YP_001872659.1 Strain : Yersinia pseudotuberculosis PB1/+ Genome accession: NC_010634 Putative virulence/resistance : Virulence Product : type I secretion system ATPase Function : - COG functional category : V : Defense mechanisms COG ID : COG2274 EC number : - Position : 2468845 - 2470983 bp Length : 2139 bp Strand : + Note : KEGG: yps:YPTB2171 putative ABC RTX toxin transporter, fused ATP binding/permease domains; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase DNA sequence : ATGACGGAGTCTTATTCAACTCTGGCCGCCGAGGGCACCAAGGTTATTCAGCCACTGGAGGCGTTGGCGTATGCTGCTAC CTGTTTTGATTTAACCATCGAAGCTTCGCAATTGGCACACCAACTAGGCTTAGCTCCCGATGAGATAGACAGTATTGCCT TGTGCCGTTGTGCTGCTTGGATAGGGTTACGAGCGCGGAAAGTTAATCAGTCTTTTGAACGTGTGGGAAAGCTGGTATTA CCCGTTTTATTCAGTGATGGTGCTCAGTGGTATGTTTTGCTGTCGCTGACCGCGCAGGAGGCCACTGTCTATTTTGCAGG CAGCGACCAGACGCGGAAAATAAGTCCAGAAGTCCTGGCAAAATTGTGGCGCAATGAGGTGATTTTGCTGGCGAAAGCGG AACCGATAACGGCCAAAAAGCAGTTTTTCGGTTTTAGCTGGTTTATTCCGGTGGTGATGAAGTCCCGGCATCAGCTACGT AACATTATTCTTATCTCATTACTGCTACAAGCCATTTTACTCGTCACGCCAATGCTATTTGAAACCGTTATCGATAAAGT GTTGGTAAGCCGCGGGGTCGATAGTTTGGTGGTTCTAGGTGGAGCCATGGTGGCACTGGCGATTGCTGAACCGGGGTATA CCTTATTACGTAGCTGGCTGTTTGCGCATTTGTCCAGCAGGGTGGGGGCTGAACTCAATACACAGTTATATCGGCATCTT CTGGGGCTGCCACTGGGGTATTTTACCGGCCAACAGACAGGGCAAACTATCGCCAAGATGCGAGAAATGGAGCAAATTCG CAGCTTCCTTACGGGCTCAGCCCTGACTATGGTGTTGGATCTGTTTTTTGTCGTCACCTTTATTGCCGTGATGTTTCGCT ACAGTGGTCAATTGACGGGGATCGTATTGATTTCCCTGCTTTGTTATCTGCTATTTTGGTCGGCAGTTGGGGGGCGGTTA CGCAAGCGAGTGGCGCAGCAATACGAAACCAGTGCGCAAGCAACCTCGTTCCTGACCGAGGCGGTCAGCGGGGTGGAAAC CATCAAAACCTCGGCAACCGAAAGTCAGTTTAACCGGCGTTGGCGTCAAGTATTAGCACGCTATGTCCGGGCCTCTTTTG GCAGTTCGCAGGCAGGGAACTTGGCAGGCCAAGGGATCTCGCTCATTAATAAAATAACGTCAGCAATTCTGTTGTGGTTT GGCGTGACCCTCGTATTGGCTGGAAAACTCAGCCCAGGTGAACTGGTGGCGTTTAATATGTTTGCCGGTTACGTTACCCA ACCTATATTACGATTGGCTCAGGCATGGCAAGACTTCCAACATACGCAGATTGCGCTGGAGCGGATTGGCACCATTCTGG ATAGCCCCACCGAACCCGGAAGTGCCGGGCTGGTTGCCAACTGTAAACGGGCAGGGAGCTTAAGTTTTAAGCAAGTGCGC TTCCGTTATCGCCCTGATACCGCAGAAGTTTTACAAAATCTCAATCTGGAGATTGCCGGTGGAGAATTTATCGGCATTAC CGGGCCATCGGGGTGCGGTAAATCGACACTGACCAAGCTAATGCAACGCTTATATACGCCACAACATGGGCAGATTCTGG TCGATGGGCAGGATTTGGCGATTACTGACCCCACCACGCTGCGCCGTCAAATGAGTGTGGTATTGCAGGAGAGCGTTCTA TTTTCGGGCAGCATTCGGGACAATATTTGTCAATGTCGGCCCAATGCAGATGAGGCTCATGTGATACATATTGCCCGGTT GGCCGGGGCGCATGATTTTATTATAGCGTTGCCGCAGGGTTATCAAACTCAGGTCGGTGAAAAGGGGGGGCTGCTTTCTG GCGGGCAACGTCAGCGGATTGCACTGGCAAGGGCGCTGATGGCTGATCCCAAGATTCTTATCCTTGATGAAGCAACCAGT GCGTTGGACTATGAATCGGAGGCGGCGATTATGCGCCAATTACCGGAAATCACCCGTAACCGCACGGTTATCTGCATTGC ACACCGTTTGAATACACTACGTCAGTGCCACCGCATTTTGTTACTAAAAGATGGGCAAATTGCGGAGCAAGGTAGTCATG AAGTCTTGGTAGCAAGTGGTGGGAATTACGCTCGTCTGTGGCAACAGCAGACAGAGTAG Protein sequence : MTESYSTLAAEGTKVIQPLEALAYAATCFDLTIEASQLAHQLGLAPDEIDSIALCRCAAWIGLRARKVNQSFERVGKLVL PVLFSDGAQWYVLLSLTAQEATVYFAGSDQTRKISPEVLAKLWRNEVILLAKAEPITAKKQFFGFSWFIPVVMKSRHQLR NIILISLLLQAILLVTPMLFETVIDKVLVSRGVDSLVVLGGAMVALAIAEPGYTLLRSWLFAHLSSRVGAELNTQLYRHL LGLPLGYFTGQQTGQTIAKMREMEQIRSFLTGSALTMVLDLFFVVTFIAVMFRYSGQLTGIVLISLLCYLLFWSAVGGRL RKRVAQQYETSAQATSFLTEAVSGVETIKTSATESQFNRRWRQVLARYVRASFGSSQAGNLAGQGISLINKITSAILLWF GVTLVLAGKLSPGELVAFNMFAGYVTQPILRLAQAWQDFQHTQIALERIGTILDSPTEPGSAGLVANCKRAGSLSFKQVR FRYRPDTAEVLQNLNLEIAGGEFIGITGPSGCGKSTLTKLMQRLYTPQHGQILVDGQDLAITDPTTLRRQMSVVLQESVL FSGSIRDNICQCRPNADEAHVIHIARLAGAHDFIIALPQGYQTQVGEKGGLLSGGQRQRIALARALMADPKILILDEATS ALDYESEAAIMRQLPEITRNRTVICIAHRLNTLRQCHRILLLKDGQIAEQGSHEVLVASGGNYARLWQQQTE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hlyB | NP_755448.1 | hemolysin B | Virulence | PAI I CFT073 | Protein | 2e-139 | 44 |
| hlyB | CAD33760.1 | hemolysin B | Virulence | PAI I 536 | Protein | 1e-139 | 44 |
| hlyB | CAD42038.1 | HlyB protein | Virulence | PAI II 536 | Protein | 1e-139 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| YPTS_2241 | YP_001872659.1 | type I secretion system ATPase | VFG0841 | Protein | 6e-137 | 45 |
| YPTS_2241 | YP_001872659.1 | type I secretion system ATPase | VFG1269 | Protein | 1e-138 | 45 |
| YPTS_2241 | YP_001872659.1 | type I secretion system ATPase | VFG1501 | Protein | 6e-140 | 44 |
| YPTS_2241 | YP_001872659.1 | type I secretion system ATPase | VFG0907 | Protein | 7e-140 | 44 |
| YPTS_2241 | YP_001872659.1 | type I secretion system ATPase | VFG1557 | Protein | 6e-140 | 44 |
