Gene Information

Name : YPTS_2770 (YPTS_2770)
Accession : YP_001873187.1
Strain : Yersinia pseudotuberculosis PB1/+
Genome accession: NC_010634
Putative virulence/resistance : Unknown
Product : type VI secretion protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3520
EC number : -
Position : 3077595 - 3078620 bp
Length : 1026 bp
Strand : +
Note : TIGRFAM: type VI secretion protein, VC_A0111 family; PFAM: protein of unknown function DUF1305; KEGG: ypi:YpsIP31758_1360 hypothetical protein

DNA sequence : 
ATGTTGCCCGATGAATCCGTTCACCAGGAAAAACATGCCAATCTGGACGCCTGGTATCAGGAGTCTCAGCCATGGAACGC
CGGTTTTATCAGCATGATGCGGGCGAATGCCGCCCGCAACCCTACCCTGCCAGCGCCAGGAAAAGCGCCCTTGCCTGAAC
AGGAAGCCTTCCGCATCGGGCAAAGTGCGCACATGACGTTCTCTCCGCGTGAGATATCTCATGCGGTTATGAAAGACGGG
AAAATGGATCTGCAACTTTTTGGCTTAGGGATTTGGGGGCCAAATGGTGCGATGCCGCTTCAGATGACCGAACTGGCCTA
TACCCGTGCCGAGTTGCATGATCATACGATGACGGACTTCGTCGACCTTTTTCATCACCGCGCATTATCACAGCTTTATC
GGGCGTGGTTTGTCTCTCAGGATACCGCCTCGCTAGACCGGCAGAGTGATGAAAAATTCTCCTTCTATGTCGGTAGTCTG
GCCGGGCTGGATCCTCAAGAACTTAATGACACCGAACTCCCGGTTCATGCCCGGTTAGCCTCCTCTGCCCATTTGATTCG
TGAAGCGCGCAACCCCGAAGGGCTCGTGGGCGCATTGCAGTATTACTTTGACGTCCCCGTGCGGATGGTGGAGTACGCCG
AACAGTGGATCTTTCTGGAAGAAAGCGACCAGACACAATTGGGTGATGGTGCCGGCGCGATGCTCTTGGGCGACGGTGCT
ATTTTGGGCAATACCGTTTTGGATCGGCAGCATAAATTTCAACTGATCCTCGGCCCCCTCAGCCTGCAACAGTACCTGCG
CTTTAGCCTCTGGGGACAAGACTTACCAGTATTGCGAGAGTGGGTACGTAACTTTGTTGGGTTCGAATACGCCTGGGAAG
TCCAGTTGTTGTTAAGCGCCGATGAGGTTCCCATGGCAACACTCGATGGCGGACATCAATTGGGATACACCTCTTGGTTA
GCCCGCAGTGATACCACCCTTGATGTCGGTGGGATGAGTTTTGAGCCTGAAATGCATCACGATTAA

Protein sequence : 
MLPDESVHQEKHANLDAWYQESQPWNAGFISMMRANAARNPTLPAPGKAPLPEQEAFRIGQSAHMTFSPREISHAVMKDG
KMDLQLFGLGIWGPNGAMPLQMTELAYTRAELHDHTMTDFVDLFHHRALSQLYRAWFVSQDTASLDRQSDEKFSFYVGSL
AGLDPQELNDTELPVHARLASSAHLIREARNPEGLVGALQYYFDVPVRMVEYAEQWIFLEESDQTQLGDGAGAMLLGDGA
ILGNTVLDRQHKFQLILGPLSLQQYLRFSLWGQDLPVLREWVRNFVGFEYAWEVQLLLSADEVPMATLDGGHQLGYTSWL
ARSDTTLDVGGMSFEPEMHHD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0288 NP_454870.1 hypothetical protein Not tested SPI-6 Protein 2e-62 45