|
Name : YPTS_3810 (YPTS_3810) Accession : YP_001874220.1 Strain : Yersinia pseudotuberculosis PB1/+ Genome accession: NC_010634 Putative virulence/resistance : Unknown Product : type VI secretion-associated protein Function : - COG functional category : S : Function unknown COG ID : COG3515 EC number : - Position : 4250202 - 4251590 bp Length : 1389 bp Strand : - Note : TIGRFAM: type VI secretion-associated protein, VC_A0119 family; PFAM: ImpA domain protein; KEGG: ypi:YpsIP31758_0325 ImpA domain protein DNA sequence : ATGGATATCACGTCACAACATCCCTGGCATGTCTTGTTACAAGCCCCTTTGTCACCTGAGCAGACCGCACAAGCCCTGGC CGATGATGACCCCCAATGGGAATATATCGACGGCCAGATGGTGAAACTGGGGTCATTGGCCCACGCCACGCTGAATATTG ATGATATTCAGCAACAAGCCATGGCGCTGTTATCACAGAAAAGTAAAGACTTCCGGCTCGTGGTGCATCTACTGCGCACC CTACAACACGGGGGCCAGCCAGATGAATTAATGCTGGCGATGTCGTTGCTGACCGAATACGTCCAGCTATTTTGGACTAC GGCCTGGCCGCAAAATCCTTTACACAAACGGCGCTTTGCCCAACAAATCCTAAAACGCTTTGACAGCGCCAGCAGCAGTT TTAGCCAACGAGCGGACGAGGCTCAACGTGAGAATGTGCAAGGATTATTGGCACATTTAGCACAGGTTTGGCATAGCCGT GAGCCGGGTCTGGCTAAAGAGGTGGATGCATTACGCAGCCGCTATGCGCGGCCACCGGAGCGGGTTATCGAAGCAGTGGC TTCTGATGAACCGCTCTCATCCAACACCTTGGCGGCGGCAATGGCCGCCACCCCCGTTAGCCCAAGCCTCGCCATAGATA ACACGAGCGACAGAGCCTGGCGGCAGACCTTGCTGAAAATGGCGGATTTACTGAGCGAACAGCAACCCGATGCCGCTATC GGTTTCCGGTTACGCCGCCATGCCGTATGGGGCGCGTTAACCGCGCCACCTATGGCGCAGAGCGATGGCCGCACCCCGTT GGCCGCAGTTTCTGCGGATCGAACCGCCGATTACTTAGCACGTCTGGCTAATGCCGATTTGCCTTTGTGGCACCAAGTGG AGCAGAGCCTCACCCTCGCGCCTTATTGGCTGGATGGGCATGTGCTTTCGGCACAAATCGCCCTGCAACTGGGTTATGAC GCGGTGGCACAGGCTATCCGTGATGAACTCAGCGTTTTTTTAGCCCGTATTCCCGCATTAAAAACCCTCTTTTTTACGGA TATGACGCCATTCCTCTCCTCTGAATCTGCCGCCTGGTTACAGCAGGATGCGAATCATCAGGGAAGAAGTCGCACTATTG AACAGGATGAAATTTGGCAATGCTATCAACAGCAAGGATTGGAAGCCGCACTACAGATGATAAACCGGCAACCACAGCAA TCCGAACCTCGGGACCGTTTTTACCATCAATTGCTCAGTGCACAGTTGTTCGAAAAAGCAGGGTTAACCGCATTGGCGCA GCAGCACTACCACAGCTTATTACTGGTAGGGCAGCAATTACAGCTAAGCGAATGGGAACCTGCGTTGATCGCTCTACTGA CAGAAAAACAGCGACAACTCAAACCATGA Protein sequence : MDITSQHPWHVLLQAPLSPEQTAQALADDDPQWEYIDGQMVKLGSLAHATLNIDDIQQQAMALLSQKSKDFRLVVHLLRT LQHGGQPDELMLAMSLLTEYVQLFWTTAWPQNPLHKRRFAQQILKRFDSASSSFSQRADEAQRENVQGLLAHLAQVWHSR EPGLAKEVDALRSRYARPPERVIEAVASDEPLSSNTLAAAMAATPVSPSLAIDNTSDRAWRQTLLKMADLLSEQQPDAAI GFRLRRHAVWGALTAPPMAQSDGRTPLAAVSADRTADYLARLANADLPLWHQVEQSLTLAPYWLDGHVLSAQIALQLGYD AVAQAIRDELSVFLARIPALKTLFFTDMTPFLSSESAAWLQQDANHQGRSRTIEQDEIWQCYQQQGLEAALQMINRQPQQ SEPRDRFYHQLLSAQLFEKAGLTALAQQHYHSLLLVGQQLQLSEWEPALIALLTEKQRQLKP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec29 | YP_851416.1 | hypothetical protein | Not tested | PAI II APEC-O1 | Protein | 2e-98 | 46 |
| aec29 | AAQ96723.1 | Aec29 | Not tested | AGI-1 | Protein | 2e-98 | 46 |
