Gene Information

Name : fecI (BAV1207)
Accession : YP_785729.1
Strain : Bordetella avium 197N
Genome accession: NC_010645
Putative virulence/resistance : Virulence
Product : RNA polymerase ECF family sigma factor
Function : -
COG functional category : K : Transcription
COG ID : COG1595
EC number : -
Position : 1296959 - 1297468 bp
Length : 510 bp
Strand : +
Note : -

DNA sequence :

GTGTCCGTCATCCCCGACAAAGCCAACGCATCCGTGGACGGCCTGTATCGCCAACACCGTTCCTGGTTGATGGGGTGGTT
GCGGCGCAAGCTGGGGGGCTCGGATCATGCCGAAGACATGGCGCAGGATGTTTTCATTCGCATCATTCAAGGGCGCAAAC
AAGTCGATGTAGTCCAGGCTCGCGCCTTCCTGACCACGATCGCACGCGGCATGCTCATCGATCACTGGCGCCGTGCCGCA
CTGGAAGCGGCTTATCGCGACTATCTCGCCAGTCTGCCTCAGGTGAGCGAGCCAGGACCCGAGGCGCGTATCGAGGTCAT
GCAATCGCTCGCCGTGCTTGATCGGATGCTAGCTGGCTTGTCGCCGCGTGCCCGTGAGGCTTTTATGTTGTCGCAAATTG
ACGGTCTGACCTATCCCGAGATCGCAGTTCGCCTTGGGGTATCGGTCAGCTCGGTGCAGCAATACATGGTGAAGGCCATG
AGCGCCTGCTATGAGGTGTTTCATGCTTGA

Protein sequence :

VSVIPDKANASVDGLYRQHRSWLMGWLRRKLGGSDHAEDMAQDVFIRIIQGRKQVDVVQARAFLTTIARGMLIDHWRRAA
LEAAYRDYLASLPQVSEPGPEARIEVMQSLAVLDRMLAGLSPRAREAFMLSQIDGLTYPEIAVRLGVSVSSVQQYMVKAM
SACYEVFHA

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
unnamed	AAL08458.1	FecI	Virulence	SRL	Protein	3e-35	46

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
fecI	YP_785729.1	RNA polymerase ECF family sigma factor	VFG1049	Protein	1e-35	46