Gene Information

Name : BAV1842 (BAV1842)
Accession : YP_786361.1
Strain : Bordetella avium 197N
Genome accession: NC_010645
Putative virulence/resistance : Virulence
Product : RNA polymerase sigma factor
Function : -
COG functional category : K : Transcription
COG ID : COG1595
EC number : -
Position : 1933343 - 1933834 bp
Length : 492 bp
Strand : +
Note : -

DNA sequence : 
ATGTCCAATCCGCTTCAGGCAGTTTGTGAAGATCACTACGTTTGGCTTTGCCAGTGGTGGCGCCGACGACTCGACCACGC
CGACGAGGCTGCGGATCTGGCGCACGACACTTTTTTGCGGGTATTGCGCAAACCCGAAGAGATATCCTGCCTGCGCCAGC
CGCGCGCTTACCTGACCCCGATCGCGCGCGGCCTGCTCAACGACCATTGGCGCCGCCGCTCCCTGGAGCGAGCCTGGCTG
GAAGCGCTGGCCCAACTGCCCCCCGAGTACGAGATCGCCCCCGACATGCTCTTGCAGATGCAGCAGGCCCTGCAACACCT
CGACGATATGCTGGCCGCGCTGGCCCCACGCGCCCGTGAGGTTTTTGTGCTGTCGCAGTTGGAGGGGCTGTCCTATGCCA
AAATTGCCGCGCAGACCGGCCTGAACGAGCGCACCGTCAAACGCTATATGGCCCAGAGCTTCGAGCACTGCCTGACGCTC
GTGGGCGGTTGA

Protein sequence : 
MSNPLQAVCEDHYVWLCQWWRRRLDHADEAADLAHDTFLRVLRKPEEISCLRQPRAYLTPIARGLLNDHWRRRSLERAWL
EALAQLPPEYEIAPDMLLQMQQALQHLDDMLAALAPRAREVFVLSQLEGLSYAKIAAQTGLNERTVKRYMAQSFEHCLTL
VGG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08458.1 FecI Virulence SRL Protein 7e-19 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BAV1842 YP_786361.1 RNA polymerase sigma factor VFG1049 Protein 3e-19 42