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Name : glcD1 (BAV2151) Accession : YP_786667.1 Strain : Bordetella avium 197N Genome accession: NC_010645 Putative virulence/resistance : Unknown Product : glycolate oxidase subunit Function : - COG functional category : C : Energy production and conversion COG ID : COG0277 EC number : - Position : 2300935 - 2302434 bp Length : 1500 bp Strand : - Note : Also similar to the upstream CDS, BAV2152, (30.947 identity). DNA sequence : ATGACTCCACTCATTGCAGCCGGCCTGAGCCCTATCCAGGCGCCGTTTTCTCAGCGCGAGCTGGTTCAGGTCTTGCGGAC TGTTCTGCCGCATCACTGTGTGCTGTACCGCGAGGAGGATACGCGGCCTTATGAGTGCGATGGCCTGTCTTTGTATCGTG CGCTGCCGGCGGTCGTGGCGCTGCCCGAAACCGAGGCGCAGGTGTGCCAGGTATTACGAGTCTGTAAACGCTTGAATGTG CCCTTGGTGGCCCGGGGTGCGGGTACGGGCCTGTCGGGCGGCGCGATGCCGCATAAGCAGGGTGTGCTGCTCGGTTTGTC CAAGCTTAATCGCATCAAGCGCATTGATCCTGACGCCGGTGTAGCCGTCGTCGAGCCGGGGGTGCGTAATCTGTCCATTT CGGAGGCTGCCGCACCGTTCGGTCTTTATTACGCACCCGATCCCTCCAGCCAGATCGCCTGTTCGATAGGCGGTAACGTG GCAGAGAATGCGGGTGGCGTGCACTGTTTGAAGTATGGGCTTACCGTACACAATGTGCTCAAGCTGCGGGTGGTGACAAT TGACGGCGAGGTAGTGGAGTTGGGCGGCGATGCCCCTGATGCGCCGGGGCCCGAGTTGCTGCCTCTGTTTATCGGTTCCG AGGGTATGTTGGGGGTCGTGACCGAGGTCACGGTCAAGCTCATACCCAAGCCGGCCTGCGCACAGGTGGTGATGGCCAGC TTCGCCAGTGTGGAGGCTGCGGGTAATGCCGTAACCCAGATCATTGCCGCGGGCATTATCCCTGCTGGTCTGGAAATGAT GGACCGGCAAGCCACGCATATGGTCGAGCCGTTCGTGCAGGCCGGCTACGATCTCGACGCGCAGGCAATATTGCTCTGCG AGTCTGACGGCACGCCAGAAGAGGTCGCGCACGAGATCGGGCGCATGGAAGAGGTATTCCGGGCGGCGGGAGCAACACGA TCTCAGGTGTCCGAGTCCGAGGCTGAGCGTTTGCGCTTCTGGGCCGGCCGCAAAAACGCCTTTCCTGCGGCGGGACGCGT CTCGCCAGATTATTACTGCATGGATGGCACGATTCCGCGCCGGCATCTGGCCCAGGTGCTCAATGCCATCGAGCATATGG AAGACGAGTTTGGCCTGCGTTGCGCCAATGTCTTCCATGCGGGCGATGGGAATCTCCACCCCCTGATTCTGTTCGACTCC AATAAGCCGGAAGAGGTGGAGCGGGCCGACAAGTTCGGCGCGGCCATCCTCGAGTTGTGTGTTCAGGTCGGCGGTACCGT GACGGGAGAGCACGGCGTGGGCATAGAGAAAATAAATCAGATGTGCGTGCAGTTTTCGCGTGAGGAGTTGGACGCTTTTT TCGAGGTCAAGCGCGCCTTCGATCCGCCTGGCTTGTTAAACCCCGAGAAGATGATTCCGACGCTGGCGCGCTGTGCCGAG TACGGCAAGATGCATGTGCATGCAGGTGCGCTGCGCTTTCCCGATCTGGCTCGTTTCTGA Protein sequence : MTPLIAAGLSPIQAPFSQRELVQVLRTVLPHHCVLYREEDTRPYECDGLSLYRALPAVVALPETEAQVCQVLRVCKRLNV PLVARGAGTGLSGGAMPHKQGVLLGLSKLNRIKRIDPDAGVAVVEPGVRNLSISEAAAPFGLYYAPDPSSQIACSIGGNV AENAGGVHCLKYGLTVHNVLKLRVVTIDGEVVELGGDAPDAPGPELLPLFIGSEGMLGVVTEVTVKLIPKPACAQVVMAS FASVEAAGNAVTQIIAAGIIPAGLEMMDRQATHMVEPFVQAGYDLDAQAILLCESDGTPEEVAHEIGRMEEVFRAAGATR SQVSESEAERLRFWAGRKNAFPAAGRVSPDYYCMDGTIPRRHLAQVLNAIEHMEDEFGLRCANVFHAGDGNLHPLILFDS NKPEEVERADKFGAAILELCVQVGGTVTGEHGVGIEKINQMCVQFSREELDAFFEVKRAFDPPGLLNPEKMIPTLARCAE YGKMHVHAGALRFPDLARF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcD | CAE85245.1 | GlcD protein | Not tested | PAI V 536 | Protein | 1e-141 | 61 |
