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Name : BAV0602 (BAV0602) Accession : YP_785134.1 Strain : Bordetella avium 197N Genome accession: NC_010645 Putative virulence/resistance : Unknown Product : metabolite transporter Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2814 EC number : - Position : 624594 - 625994 bp Length : 1401 bp Strand : + Note : - DNA sequence : ATGCTCTACACCCAAGGAATTGCTTCCATGACAGACTCAACCACTGCAGCAGGACAGGATAAGCAGAAGCGGCGCGCTAT CTTGGCCAGCTATCTCGGAACGACGCTCGAGTATTACGACTTTCTCTTGTATGGCGTCGCGGCGGCGCTGGTGTTTCCCC AGATTTTTTTCGTAACGCTGGACCCCTTGGCGGCCACGCTGTCGTCGTTTGCGACCTTTGCCGTGGGGTATTTCGCGCGG CCCTTGGGTGCGGTGGTGTTCGGCCACTATGGCGATAGACTGGGGAGAAAGAACGTCCTGGTGGTCACACTGATCCTGAT GGGGCTTTCCAGCATGCTGATCGGTCTGCTGCCGTCGTATAGCCAGATTGGCATCGCGTCTCCGATCCTGCTGGTGGTTC TGCGGCTGCTGCAAGGGATTGCGATCGGCGGCGAGTGGGGCGGCGCGACGCTGATGTCTATGGAGCACGCCAAGCCGCGG GCGCGCGGCCTGGCGGTCAGCCTGGTCAGCGCGGGCGGACCCTCTGGCGCTGTGCTGGGAACGCTTGTGATGACGCCCTT CACCTTGCTGCCCAGCGACCAGTTCCTGGCATGGGGATGGCGTATTCCCTTTCTGCTCAGCGCGCTGCTGATGGTGTTGG GGCTGATCATACGCGTACGCGTCACAGAGACGCCGGAGTACGAGGCCGCGCGTAAGGAGCAGGCCGCCAAAGGGGTGCCC AAAGCTATCCCGCTGGTGATCGTGTTCCGCCACAACAAGGGCCAGGTGCTGTCGGGCGTATTGGGTGGATTGGCGCCGCT TTCTTTCGCGACCTTTGCAGCGGCGTTTCTGTTGAACTATTCCGTGGAGGTCGGCCATACGCGGACCAGCGCGCTGATGG CGATGACCATCGCCAACTTCCTCAATATCTTCACGCTGCCTCTGTTCGGGGCGGTCTCGGATCGCATTGGCCGCCGGCCG ATGATGATTGCGGGCGCGGTCGGCGGCATGTTGCTCATCTGGCCTATTTTCCAACTGGTGCACAACGGTTCGTTCCTGAC CCTGCTGTTGGCGATGGTGCTGGCCATGCCGGTTATCCAGGCGATGATGGGAGGAGTGTTCAACACGTGGATCAGCGAGA AGTTCGCTGCCGACGTGCGCTATAGCGGAATCGCGCTGACCTTCCAGATTGCGTCCACCTTGGGGGCTGGCCTGTCGCCC CTGATTGCCGCAAGCCTGCTGGCGGCCTCGGGCGGAACTAACCCGCAATGGGTGGCTGCCTATTTCGCGGGCATCTGCCT CATCAGTTGTGTGGCGTACCTGCTGGGTAAAGAGCGCTTCGACCAGGAGCTGCCTGCTAATACCGAAGGCGTAGAGGACG CAGCGCAGACAGCTCCCGTGACCAGAAAAATGCTCGCCTAG Protein sequence : MLYTQGIASMTDSTTAAGQDKQKRRAILASYLGTTLEYYDFLLYGVAAALVFPQIFFVTLDPLAATLSSFATFAVGYFAR PLGAVVFGHYGDRLGRKNVLVVTLILMGLSSMLIGLLPSYSQIGIASPILLVVLRLLQGIAIGGEWGGATLMSMEHAKPR ARGLAVSLVSAGGPSGAVLGTLVMTPFTLLPSDQFLAWGWRIPFLLSALLMVLGLIIRVRVTETPEYEAARKEQAAKGVP KAIPLVIVFRHNKGQVLSGVLGGLAPLSFATFAAAFLLNYSVEVGHTRTSALMAMTIANFLNIFTLPLFGAVSDRIGRRP MMIAGAVGGMLLIWPIFQLVHNGSFLTLLLAMVLAMPVIQAMMGGVFNTWISEKFAADVRYSGIALTFQIASTLGAGLSP LIAASLLAASGGTNPQWVAAYFAGICLISCVAYLLGKERFDQELPANTEGVEDAAQTAPVTRKMLA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_1067 | YP_853084.1 | shikimate transporter | Not tested | PAI IV APEC-O1 | Protein | 7e-50 | 41 |
