Gene Information

Name : Amuc_0403 (Amuc_0403)
Accession : YP_001877022.1
Strain : Akkermansia muciniphila ATCC BAA-835
Genome accession: NC_010655
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 484496 - 485149 bp
Length : 654 bp
Strand : -
Note : PFAM: ABC transporter; SMART: AAA ATPase; KEGG: psb:Psyr_1905 ABC transporter

DNA sequence : 
GTGATTACCGCCTCCAACCTCCACCGCAGCTATTCCATCGGCAAGAAGTCCATTGAGATCCTGCATGGGGTGGATTTGCA
CATTGCCGCCGGAGAGAAGGTGTTCCTGTGCGGGCCCAGCGGGGCCGGAAAGACCACGCTGATGTACACGCTGGCCGGAT
TGGAAACGCCGCAAGAGGGAAAGGTCACGATTGACGGCACGGATATTTACGCCTTGTCCGCCACGGCCCGGTCCGTGTTC
CGGAACCGGAGCATGGGGTTTATTTTCCAGAATTATCTGTTGATGCCGGAATTGACGGCGCTGGAAAACGCCTGTCTGGC
TTCCTCCATCGGCAGGAGGCCGCGCGTGGAATATGTGAGGGAACTGATGGAGCGCGTGGGTTTGTCCCACCGCCTGAACC
ACCTGCCCAGCGAACTGAGCGGCGGGGAACAGCAGCGCGTGGCAATCGCCCGTGCCCTGGCGAACGACGCCCCCATTATT
TTTGCGGATGAACCTACCGGGAACCTGGACCGGAAGAACGGCGCGGAGGTGCTGGACCTTTTGTTCGGCCTGGCGGACGA
GTCCCGCAAAACGCTGGTGATTGTGACGCATGACGAACATCTGGCACGGAGAGGGGACCGCATTATTACGATTATGGACG
GGCAGGCCGTCTGA

Protein sequence : 
MITASNLHRSYSIGKKSIEILHGVDLHIAAGEKVFLCGPSGAGKTTLMYTLAGLETPQEGKVTIDGTDIYALSATARSVF
RNRSMGFIFQNYLLMPELTALENACLASSIGRRPRVEYVRELMERVGLSHRLNHLPSELSGGEQQRVAIARALANDAPII
FADEPTGNLDRKNGAEVLDLLFGLADESRKTLVIVTHDEHLARRGDRIITIMDGQAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-32 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Amuc_0403 YP_001877022.1 ABC transporter NC_012469.1.7685735. Protein 3e-33 43
Amuc_0403 YP_001877022.1 ABC transporter NC_008702.1.4606598. Protein 1e-30 42
Amuc_0403 YP_001877022.1 ABC transporter NC_012469.1.7686878. Protein 1e-38 42
Amuc_0403 YP_001877022.1 ABC transporter CP001581.1.gene798.p Protein 6e-38 41