Gene Information

Name : SbBS512_E0913 (SbBS512_E0913)
Accession : YP_001879601.1
Strain : Shigella boydii CDC 3083-94
Genome accession: NC_010658
Putative virulence/resistance : Unknown
Product : transthyretin family protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG2351
EC number : -
Position : 852683 - 853096 bp
Length : 414 bp
Strand : -
Note : identified by match to protein family HMM PF00576; match to protein family HMM TIGR02962

DNA sequence :
ATGTTAAAGCGTTATTTAGTACTCTCGGTAGCAACGGCAGCATTTTCATTACCTTCTTTGGTTTATGCCGCACAACAAAA
CATTCTTAGCGTGCACATTTTGAACCAGCAAATAGGAAAACCCGCTGCCGACGTGACAGTCACTCTTGAAAAGAAATCGG
ACAACGGCTGGTTACAACTTAATACCGCCAAAACAGATAAGGATGGACGAATTAAGGCACTGTGGCCCGAGCAAACTGCA
ACTACGGGCGATTACCGTGTCGTATTTAAAACCGGGGACTATTTCAAGAAACAAAATCTTGAAAGTTTCTTCCCTGAGAT
CCCCGTTGAATTTCATATTAATAAAGTGAACGAGCATTATCATGTGCCTTTATTACTTAGCCAATATGGGTATTCAACCT
ATCGTGGCAGTTAA

Protein sequence :
MLKRYLVLSVATAAFSLPSLVYAAQQNILSVHILNQQIGKPAADVTVTLEKKSDNGWLQLNTAKTDKDGRIKALWPEQTA
TTGDYRVVFKTGDYFKKQNLESFFPEIPVEFHINKVNEHYHVPLLLSQYGYSTYRGS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAC33718.1 unknown Not tested SPI-5 Protein 1e-41 67