Gene Information

Name : Rpic_3987 (Rpic_3987)
Accession : YP_001892519.1
Strain :
Genome accession: NC_010678
Putative virulence/resistance : Unknown
Product : major facilitator superfamily protein
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG2271
EC number : -
Position : 253796 - 255121 bp
Length : 1326 bp
Strand : +
Note : PFAM: major facilitator superfamily MFS_1; KEGG: bch:Bcen2424_5390 major facilitator superfamily MFS_1

DNA sequence :
ATGCAAGTGACGGGCAGTACCGGTGTGACGGAAATCGAGCAGCGGACCCTGCGCAAGGTGGTCTGGCGGCTCGTGCCGTT
TCTCATGCTCTGCTACCTGCTGGCCTTCATCGACCGCGGCAACGTGGGCATGGCCTCGCTTCAGATGAACCATGACCTTG
GGCTGACAGCACGCGTATTCGGGTTCGGCAGCAGCCTCTTCTTCGTGTCGTATTTCTTCTTCGAGGTGCCTAGCAACCTG
GCGCTGCAGCGCTACGGCGCGCGTATCTGGATCGCGCGGATCATGATCACCTGGGGCCTGATCTCGGCCGCGACGGCGCT
GGTGAGCGGCCCGGCATCGTTCTATGCGCTGCGCTTCCTGCTGGGCGCGGCGGAGGCAGGGTTCTTTCCCGGCGTGCTGC
TGTACCTTTCGTACTGGATTCCGGCAACGCATCGCGCGCGTATTGTGGCGACGTTCATGGTCGCGATTCCGGCGGCGAGC
TTCATCGGTTCGCCCATCTCCGCCGTGCTGCTGCAGATGGACGGGTTTGCCGGCCTGCGCGGCTGGCATTGGCTGTTCAT
CCTCGAAGGCATTCCCACGGTGCTGCTGGGCATCGCCTGCTTGCGGGTGCTGACCAATCGGCCGGAGGAAGCCAAGTGGC
TGTCGAACGAAGAGCGCCAGTGGCTCACAAATACGTTGGCCGGTGAAGCGCGCGGGCCGAAGAAAGTCGCGCAGATGCCG
CTGCTTAAGCTGTTCTGCAATCGCTACGTGCTGTGCCTCGCGCTGGTGGACGTGTGCGCATCGGCCGCCGGCAGCACGCT
GTCGGTGTGGCAGCCGCAGCTGCTGAAATCGTTCGGGTTGACCGTCATGCAGACGGGGCTGCTCAACTCGGTGCCGTATG
CGGTGGCATCGGTGCTGATGGTAGTTTGGGGCCGCCGCTCGGACCGCCTCAAGGAGCGCCGCTGGCATACCGCCATTCCC
ATGCTGCTGATCGGCCTGGGCCTGTTTGGCACGTCGCTCAGCGGCTCTCTCGTGCCGACCATGGTGATGCTGTGCGCGGT
GCTGGTCGGGGCCTATTCGTTCAAGGGGCCGTTCTGGGCGCTGGCCTCCGGCATGCTCTCGAACAGTGCAGCCGCTGCGG
GGCTGGCCACTATCAACGCGATTGCCAATCTCATCGGCGGCGGCCTGATGGTGAACGTGTACGGCTGGGTCAAGCAGGCC
ACCGGCAGCTATGCGCTGGCGTTGATGCCGCTGGCGCTTCTGACGCTGGTGAGCGTGACGACGTTGCTGCTGCTTAGTCG
CGCGAAGCCGGAAGCGCAGGTGCTGAACAAGACGGAGACGGCCTGA

Protein sequence :
MQVTGSTGVTEIEQRTLRKVVWRLVPFLMLCYLLAFIDRGNVGMASLQMNHDLGLTARVFGFGSSLFFVSYFFFEVPSNL
ALQRYGARIWIARIMITWGLISAATALVSGPASFYALRFLLGAAEAGFFPGVLLYLSYWIPATHRARIVATFMVAIPAAS
FIGSPISAVLLQMDGFAGLRGWHWLFILEGIPTVLLGIACLRVLTNRPEEAKWLSNEERQWLTNTLAGEARGPKKVAQMP
LLKLFCNRYVLCLALVDVCASAAGSTLSVWQPQLLKSFGLTVMQTGLLNSVPYAVASVLMVVWGRRSDRLKERRWHTAIP
MLLIGLGLFGTSLSGSLVPTMVMLCAVLVGAYSFKGPFWALASGMLSNSAAAAGLATINAIANLIGGGLMVNVYGWVKQA
TGSYALALMPLALLTLVSVTTLLLLSRAKPEAQVLNKTETA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96055.1 major facilitator family transporter Not tested T-PAI Protein 1e-54 45
unnamed AAT96099.1 major facilitator family transporter Not tested T-PAI Protein 1e-54 45
unnamed AAT96228.1 major facilitator family transporter Not tested T-PAI Protein 1e-54 45
unnamed AAT96116.1 major facilitator family transporter Not tested T-PAI Protein 9e-55 45
unnamed AAT96176.1 major facilitator family transporter Not tested T-PAI Protein 7e-55 45
hpaX AAO17186.1 HpaX Not tested tcd island Protein 5e-46 42