|
Name : secD (Bphyt_0701) Accession : YP_001894349.1 Strain : Genome accession: NC_010681 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 770924 - 772987 bp Length : 2064 bp Strand : + Note : part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of DNA sequence : ATGAATCGTTACCCCCTCTGGAAATACGCCGTGATGCTGGTGGCTCTGGTCATCGGCCTCGTGTACACGCTGCCCAACCT GTTCGGCGAAGCGCCGGCGGTGCAGGTGTCGAGCGGCAAGGCAACGGTCAAGCTCGACTCGACCACGCTGTCGGCTGTCG AAGCCGCGCTCGCCGCCAATCAGATCAAGCCGGACGACGTCACGTTCGACAACTCGGCGACCAACGCGAACATCCGCGTG CGTCTGCCGGACACCGACACGCAGTTGCGCGTGAAGGACCTGCTGCAGAAGTCGCTGAACAGCGACCCGACCGATCCGCA GTACATCGTCGCGCTGAATCTGCAAAGCGCGTCGCCGCGCTGGCTGACCGCCTTGCACGCGCTGCCGATGTACCTCGGCC TCGATCTGCGCGGCGGCGTCCACTTCCTGCTGCAGGTCGACATGGCCGGCGCGCTGAACAAGAAGCTCGACTCGGACGCT TCGGACGCGCGCACGCTGCTGCGTGACAAGAACATTCGCGACGGCGGCGTGAACCGCGTCAACCAGTCGGTGGTGATCAA TTTCGCCGACCAGGCCACGGCGGACAACGCGTCGAAGCAGTTGAGCCGCAGCATCGCCGAACTCCAGTGGGCCTCGCAAG CCGGTCCCGACGGTGGCGTGCAACTGGTCGGCACGTTTACGCCGGCGGTGCAGAAAGCCGTGCAGGACGCTGCGCTCAAG CAGAACATCACCACGCTCCATAACCGCGTGAACGAACTCGGCGTGGCGGAGCCGGTGATCCAGCAGCAAGGCGCCGACCG CATCGTGGTCGAACTGCCGGGCGTGCAGGACACGGCGAAGGCGAAGGACATCATCGGCCGCACGGCGACGCTCGAAGCGC GCCTTGCCGATCCGGTCAACACGCACCCGAATCCGTCCGATCCGGTGCCGCCGGGCGACGAACTGTTCACGCAAGGCAAC CAGACGCCGGTGCTGCTGCGCAAGCAGATCATCTTCACGGGCGACCGGATCATCGACGCGTCGGCGGGCTTCGACGAACA TCAGCGTCCTTCCGTCAACATCCGTCTGGATTCGGCCGGCGGCCGCGCGGTGGCCAGCATCTCGCGCGACAACATCGGCA AGCCGATGGCCATGGTGCTGTTCGAAAAGGGCAAGGGCGAAGTGCTGACGGTGGCAACGATCCAGTCGGAACTGGGCGAC CGCTTCCAGATCACCGGCCAGGCTACGCCGCAAGGCGCCGCCGACCTCGCGCTGCTGCTGCGCGCCGGTTCGCTGGCCGC GCCGATGGACATCATCGAAGAACGCACGATCGGCCCGAGCCTCGGCGCGGACAACATCAAGAAGGGCTTCCACTCGGTGG TGTGGGGCTTCGCGGCGATCGCCGTCTTCATGATCGCGTACTACATGCTGTTCGGCGTGATCTCCATGATCGGCCTGTCG GTCAACCTGCTGCTGCTGATCGCCGTGCTGTCCATGCTGCAGGCCACGCTCACCCTGCCGGGTATCGCCGCTATCGCGCT CGCGCTCGGTATGGCGATCGACGCCAACGTGCTGATCAACGAACGCGTGCGTGAAGAACTGCGCAACGGCGCGCCGCCGC AACTGGCCATCCAGAACGGCTACGCGCATGCCTGGGCGACGATTCTCGACTCGAACGTCACCACGCTGATCGCCGGTATC GCGCTGCTCGCGTTCGGCTCCGGCCCGGTGCGCGGTTTTGCGATCGTGCACTGTATCGGCATTCTGACGTCGATGTTCTC GGCCGTGTTCTTCTCGCGCGGCATCGTCAACCTCTGGTACGGCGGCAAGAAGAAGCTGAAGTCGCTGGCCATCGGTCAGG TGTGGCGTCCGGAGACGGCGCCGGCGGGCGCGGCTGCTTACCTCGGCAGCGAAGATGCCGCGACCGACACGGCACAAGCC GTCGCCGCGGTCGCTGCCAAGCCGTCGAAAGCGAGAGCTGCGGTCGCGCAGGCACGCGCCGGCAAGCCGACCGTGCGTCG CCGCAATGCGCCGGATTCGTCCGCTACGTCGAACACGCCGCAGAAACCGGGTTCATCCCGCTGA Protein sequence : MNRYPLWKYAVMLVALVIGLVYTLPNLFGEAPAVQVSSGKATVKLDSTTLSAVEAALAANQIKPDDVTFDNSATNANIRV RLPDTDTQLRVKDLLQKSLNSDPTDPQYIVALNLQSASPRWLTALHALPMYLGLDLRGGVHFLLQVDMAGALNKKLDSDA SDARTLLRDKNIRDGGVNRVNQSVVINFADQATADNASKQLSRSIAELQWASQAGPDGGVQLVGTFTPAVQKAVQDAALK QNITTLHNRVNELGVAEPVIQQQGADRIVVELPGVQDTAKAKDIIGRTATLEARLADPVNTHPNPSDPVPPGDELFTQGN QTPVLLRKQIIFTGDRIIDASAGFDEHQRPSVNIRLDSAGGRAVASISRDNIGKPMAMVLFEKGKGEVLTVATIQSELGD RFQITGQATPQGAADLALLLRAGSLAAPMDIIEERTIGPSLGADNIKKGFHSVVWGFAAIAVFMIAYYMLFGVISMIGLS VNLLLLIAVLSMLQATLTLPGIAAIALALGMAIDANVLINERVREELRNGAPPQLAIQNGYAHAWATILDSNVTTLIAGI ALLAFGSGPVRGFAIVHCIGILTSMFSAVFFSRGIVNLWYGGKKKLKSLAIGQVWRPETAPAGAAAYLGSEDAATDTAQA VAAVAAKPSKARAAVAQARAGKPTVRRRNAPDSSATSNTPQKPGSSR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 1e-97 | 43 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 3e-97 | 42 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 2e-97 | 42 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 2e-97 | 42 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 2e-97 | 42 |
