Gene Information

Name : Bphyt_0940 (Bphyt_0940)
Accession : YP_001894583.1
Strain :
Genome accession: NC_010681
Putative virulence/resistance : Virulence
Product : type VI secretion protein EvpB
Function : -
COG functional category : S : Function unknown
COG ID : COG3517
EC number : -
Position : 1056906 - 1058405 bp
Length : 1500 bp
Strand : -
Note : TIGRFAM: type VI secretion protein, EvpB/VC_A0108 family; PFAM: protein of unknown function DUF877; KEGG: bxe:Bxe_A2094 cytoplasmic protein

DNA sequence :
ATGACAACACAGCAGGTAAAGGCAACGGCAAGCGCAACTGCCGCGCATTCACAGACCGACTTTTCGCAGTTGCTCGCGCA
GGAATTTCGCCCCAAGACCGCCGCGGCTCGGGACGCCGTCGAATATGCGGTTCAAACGCTGGCCGAGCAGGCGCTGCAGC
AGTCGATCATCATCAGCGACGACGCGTACAAGAGCATTGAAGCGATCATCGCGCAAATCGATCACAAGCTGTCGGAGCAG
ATCAACCTGATCCTCCACCACAACGATTTCCAGAAACTGGAATCGGCGTGGCGCGGTCTGCATCATCTGGTGTCGAACAC
CGAAACGGACGAGCGGCTGAAGATCCGCTTCATGGACGTTTCGAAGGAGGAACTGCGTCGCACGATGAAGCGCTACAAGG
GCCTCGCATGGGATCAGAGTCCGCTCTTCAAGCAGATTTACGAAGAGGAATATGGCCAGCTCGGCGGCGAACCGTACGGC
TGCCTTGTTGCTGACTATTACTTCGACCACACACCGCCCGACGTCGACCTGCTCGGCTCGATTGCCAAAATCTCCGCAGC
CGCGCATACGCCGTTCATCTCGGGGGCCTCGCCCTCGGTGCTGCAGATGGAGTCGTGGCAGGAACTCGCCAACCCGCGCG
ATCTGACGAAAATCTTCGCGCAAAATCTCGAGTACGCGCCGTGGAATTCCCTGCGCAATACGGAAGATGCGCGCTATATC
GGGCTCGCAATGCCGCGCTTCCTGTCGCGTCTGCCGTATGGCGCTCAGACGAACCCGGTCGATGAATTCGATTTCGAGGA
AGACACCAACGGTCCAGATCACCGCAACTATGCGTGGGCCAATGCCGCGTACGCCATGGGCGTGAACATCAACCGGTCGT
TCAAGCTGTATGGCTGGTGCTCGCTGATTCGCGGCGTCGAGTCGGGCGGCACGGTCGAGAGCTTGCCGTGCCACACGTTC
CCGACCGATGACGGCGGCATCGACATGAAGTGCCCGACGGAAATCGCAATCTCGGACCGTCGCGAAGCCGAACTGTCGAA
GAACGGTTTTATTCCGCTCGTGCACCGTAAAAACACCGACCACGCGACCTTCATCGGTGCCCAATCGGTGCAGAAGCCCG
CCGAATACCACGATCCGGATGCGACTGCCAACGCCAACCTGTCGGCGCGTCTACCGTATCTGTTCGCCTGCTCGCGATTC
GCGCACTACCTGAAGTGCATTGTGCGCGACAAGATCGGGACGTTCCGCGAGCGCGAGGATATGCAGCGCTGGCTCAACGA
ATGGATCATGAACTACGTCGACGCGGACCCGGCGAATTCATCGCAGGAAACCAAAGCACGCCGCCCGCTGGCGGCAGCCG
AAGTGGTCGTCGAGGATGTCGAAGGCAACCCCGGCTACTACCAGGCGAAGTTCTTCCTGCGCCCGCACTTCCAGCTCGAA
GGCCTCACGGTGTCGCTGCGTCTTGTTGCGCGGCTGCCTTCCGTGAAGGAAGCGGCCTGA

Protein sequence :
MTTQQVKATASATAAHSQTDFSQLLAQEFRPKTAAARDAVEYAVQTLAEQALQQSIIISDDAYKSIEAIIAQIDHKLSEQ
INLILHHNDFQKLESAWRGLHHLVSNTETDERLKIRFMDVSKEELRRTMKRYKGLAWDQSPLFKQIYEEEYGQLGGEPYG
CLVADYYFDHTPPDVDLLGSIAKISAAAHTPFISGASPSVLQMESWQELANPRDLTKIFAQNLEYAPWNSLRNTEDARYI
GLAMPRFLSRLPYGAQTNPVDEFDFEEDTNGPDHRNYAWANAAYAMGVNINRSFKLYGWCSLIRGVESGGTVESLPCHTF
PTDDGGIDMKCPTEIAISDRREAELSKNGFIPLVHRKNTDHATFIGAQSVQKPAEYHDPDATANANLSARLPYLFACSRF
AHYLKCIVRDKIGTFREREDMQRWLNEWIMNYVDADPANSSQETKARRPLAAAEVVVEDVEGNPGYYQAKFFLRPHFQLE
GLTVSLRLVARLPSVKEAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec18 YP_851426.1 hypothetical protein Not tested PAI II APEC-O1 Protein 9e-84 42
aec18 AAQ96712.1 Aec18 Not tested AGI-1 Protein 7e-84 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bphyt_0940 YP_001894583.1 type VI secretion protein EvpB VFG2070 Protein 0.0 75
Bphyt_0940 YP_001894583.1 type VI secretion protein EvpB VFG2475 Protein 4e-86 43