Gene Information

Name : Bphyt_0942 (Bphyt_0942)
Accession : YP_001894585.1
Strain :
Genome accession: NC_010681
Putative virulence/resistance : Virulence
Product : type VI secretion ATPase, ClpV1 family
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 1059058 - 1061778 bp
Length : 2721 bp
Strand : -
Note : KEGG: bam:Bamb_3473 ATPase AAA; TIGRFAM: type VI secretion ATPase, ClpV1 family; PFAM: ATPase AAA central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA; SMART: ATPase AAA

DNA sequence :
ATGACGATTTCCCGCCAGGCACTCTTTGGCAAGCTCGGGGCCACACTCTTCCGCAGCATCGAATCCGCTACCGCGTTTTG
CAAGCTGCGCGGCAACCCGTATGTGGAGCTTGTCCATTGGCTGCATCAATTGCTGCAATTACCGGACAGCGACATGCACC
GCATTGCCCGGCATGCGGGAATCGAACGTACAACACTGGAACGCGATCTCGCACGGGCGCTCGCCGCCTTGCCCGCAGGC
GCCAGTTCGATCAGCGACATCTCGCACCATATTGAACTGGCCGTCGAGCGAGCATGGGTGCTTGCCACGCTCGATTTCGG
CGACCGCCGGATACGCGGCGCGTGGTTGCTTGCAGCATTGCTTGGCACGCCGGAACTGCGTCGGGTACTGCTTTCGGCTT
CGCCCGCATTCGCTCGCATCCCGGTCGATACGCCACGCGACGAACTGATTGCGTGGATCGACGGCTCGCCCGAATCTTCC
GACTCGCCGTACGACAACACGGACTTCTCCGCCGCAGCGCCGGGCGAGGCTTCGCAGGCACTGCCCGCAGGTTCGAAGAA
CTCGCCAATCGAGCAGTACTGCAGCGACCTGAGCGCGCGAGCCCGCGCAGGTGAAATCGACATCGTGACGGGACGCGAGC
AGGAGATTCGCACGATCATCGATATCCTGCTGCGCCGCCGTCAAAACAACCCGCTGCTCACTGGCGAGGCCGGCGTCGGC
AAGACCGCTGTCGTAGAAGGGCTCGCACTTGCCATCGCTAACGGCGACGTGCCGCCCGCGCTGGCCGACGTGCGGCTCAT
GACGCTCGACGTCGGCGCATTGCTGGCTGGTGCGAGTATGAAAGGGGAATTCGAGTCGCGGCTCAAAGGCGTGCTCGAAG
CCGCGTTACGGTCCAAGACACCCATCATTCTGTTCGTCGACGAAATCCACACGCTCGTCGGCGCGGGCGGTCAGGCCGGC
ACCGGCGACGCCGCCAATCTTCTCAAGCCGGCCCTCGCGCGAGGCGCGGTGCGCATGATCGGAGCGACGACCTGGTCGGA
GTACAAGCGGCACATCGAAAAAGATCCCGCTCTCACCCGGCGCTTTCAGGTACTGCAGGTCCCCGAACCGCAGGAAGCCG
CAGCCATCGACATGGTGCGGGGACTGGCCGACACGTTTTCGAAGCACCACGGCGTGATTGTCCGAGACGAAGCGATCCGC
GCCGCCGTTACGTTGTCCCATCGCTATATTCCTTCGCGGCAGTTGCCCGACAAGGCGATCAGTCTGCTCGACACCGCATG
CGCACGCGTGGCGCTCTCGCAGCATGCGCCGCCGCGCGAACTGCAAAGCGTGCGTCAACGACTTCAGGCGGCGCGCGTCG
AGTGTGGCCTGCTTGAACAGGAGGCGCGTATCGGACTCCATGCGGAGGAGGCGCTGAGTGCCGCCAGGGCGCGCATCGGT
ACGCTCTCCACGGAGGAAAGCGCAATCGACGCACATTGGCGCGCCCAGCTCGCAGCCGCACAGGCGTTAGCGAGCGCCCG
CGACGCCATCCTTACCCAGCCCGCCCCGGATCAAGCCGATGTTGTGCCATCCCTCGCGACACTCGGCCAGCTGGAGCACA
GCCTCCTTGACCTTCAGGGTGAGACGCCACTCGTTTTCCCGGAAGTAGACGAAACGGTCATCGCGGAAATCGTCTCGGAC
TGGACCGGCATTCCCGTCGGTCGCATGGTAACGAATGAAGTTGCGGCTGTGCGCGCCTTGCCCGAAACACTCGCCGCCCG
CGTGATCGGGCAAAGTGATCCCTTGCGCCAGATCGGTGAGCGAGTGCAGACGGCGCGCGCGGGTCTTACCGATCCCCGCA
AACCACTCGGCGTGTTTCTGCTGGCGGGGCCGTCCGGCGTCGGCAAGACGGAAACGGCGCTCGCACTGGCCGAAGCTCTG
TATGGCGGCGAGCAGAACCTGATCACGATCAACATGAGCGAGTATCAGGAGGCGCACACGGTCTCCGGACTCAAGGGCGC
ACCGCCCGGATACGTCGGTTACGGTGAAGGCGGCGTGCTGACAGAAGCCGTCCGCCGGCGCCCGTATGCAGTTGTTCTGC
TCGACGAGATCGAAAAGGCGCATCACGACGTACATGAAATGTTCTTCCAGGTGTTCGACAAGGGCTACATGGAAGACGGC
GACGGACGCTACATCGACTTCCGCAATACCACGATCCTTTTGACCAGCAATGCCGGGTCCGAGCTGACAGCGAGCCTATG
CGCGGACGCCACACTCGCACCCGATCAGGACGCCCTACGTGAAGCGTTAAACCCTGAGTTGCTCAAAGTATTTCCCGCGG
CCTTTCTCGGACGCGTGACCGTCGTGCCGTATCGCCCGCTGGTTCACGCGTCGCTCGCCAGCATCGTGCGTCTGCATATG
AACCGTGTCGTGCAGCGCATGGCGGACAGTCATGGTATTGCACTGCATTACAACGAACAGGTAATCGACTACATCGTCAG
CCGCTGCCTCGTGCAGGAGACCGGCGCCCGGGTGTTGATCGGGTTTATCGAGCAACACGTTCTGCCGAGACTGTCTGCTC
TCTGGCTCGACGCTTTCTCGTCGAAGCGAGTCCTCTCGAGCATCGAAATCCAGATCGGCGACAGCAACGTCACGCCTGCT
GCCGCATTCGTCTTTGCATCTGCCAACAAGCCAGCGTTCAGCGAGAGCATTTCCCCGGTTTCAGTCGGCGAGACTCATTA
A

Protein sequence :
MTISRQALFGKLGATLFRSIESATAFCKLRGNPYVELVHWLHQLLQLPDSDMHRIARHAGIERTTLERDLARALAALPAG
ASSISDISHHIELAVERAWVLATLDFGDRRIRGAWLLAALLGTPELRRVLLSASPAFARIPVDTPRDELIAWIDGSPESS
DSPYDNTDFSAAAPGEASQALPAGSKNSPIEQYCSDLSARARAGEIDIVTGREQEIRTIIDILLRRRQNNPLLTGEAGVG
KTAVVEGLALAIANGDVPPALADVRLMTLDVGALLAGASMKGEFESRLKGVLEAALRSKTPIILFVDEIHTLVGAGGQAG
TGDAANLLKPALARGAVRMIGATTWSEYKRHIEKDPALTRRFQVLQVPEPQEAAAIDMVRGLADTFSKHHGVIVRDEAIR
AAVTLSHRYIPSRQLPDKAISLLDTACARVALSQHAPPRELQSVRQRLQAARVECGLLEQEARIGLHAEEALSAARARIG
TLSTEESAIDAHWRAQLAAAQALASARDAILTQPAPDQADVVPSLATLGQLEHSLLDLQGETPLVFPEVDETVIAEIVSD
WTGIPVGRMVTNEVAAVRALPETLAARVIGQSDPLRQIGERVQTARAGLTDPRKPLGVFLLAGPSGVGKTETALALAEAL
YGGEQNLITINMSEYQEAHTVSGLKGAPPGYVGYGEGGVLTEAVRRRPYAVVLLDEIEKAHHDVHEMFFQVFDKGYMEDG
DGRYIDFRNTTILLTSNAGSELTASLCADATLAPDQDALREALNPELLKVFPAAFLGRVTVVPYRPLVHASLASIVRLHM
NRVVQRMADSHGIALHYNEQVIDYIVSRCLVQETGARVLIGFIEQHVLPRLSALWLDAFSSKRVLSSIEIQIGDSNVTPA
AAFVFASANKPAFSESISPVSVGETH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 0.0 61

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bphyt_0942 YP_001894585.1 type VI secretion ATPase, ClpV1 family VFG2076 Protein 0.0 56
Bphyt_0942 YP_001894585.1 type VI secretion ATPase, ClpV1 family VFG2084 Protein 2e-117 41