Gene Information

Name : Rpic_1953 (Rpic_1953)
Accession : YP_001899520.1
Strain :
Genome accession: NC_010682
Putative virulence/resistance : Resistance
Product : MarR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1846
EC number : -
Position : 2064589 - 2065053 bp
Length : 465 bp
Strand : +
Note : TIGRFAM: homoprotocatechuate degradation operon regulator, HpaR; PFAM: regulatory protein MarR; KEGG: rso:RSc1592 probable transcription regulator protein

DNA sequence :
ATGGCTTCCGCCTTCAAGCACCGCAATCTTCCGCATCTCCTGCTGCGCGCGCGTGAGACCTTCATGGCGCGCTTTCGGCC
GATCCTGCGCGAGCATGGCATCACCGAACAGCAATGGCGCGTGTTGCGTACGCTCAACGATACCGGCGACATGGAGCCCA
ACCAACTCGCCGATGCATGCCTGATCCTGAGCCCAAGCCTGACGCGCATGCTGGCGGCGATGGAACAATCCGAGATGATC
GTGCGGACGAAGTCGTCGGTGGACCAGCGCCGGCAGGTGATTTCACTCACGCCTAAGAGCCGCCAGTTCCTGGCCGACGT
GGAACCGCAGGTGGATGCCGAGTACGCGCGCATTGAGGCGCAGCTGGGCCGCGCGCGGCTGGACGCGCTCTACGCCGCCA
TCGATGAGTCGATCCACGTCATGGAAACGCGCACGCCGATGGGGCGCTTCACTGGCGACGCGTAA

Protein sequence :
MASAFKHRNLPHLLLRARETFMARFRPILREHGITEQQWRVLRTLNDTGDMEPNQLADACLILSPSLTRMLAAMEQSEMI
VRTKSSVDQRRQVISLTPKSRQFLADVEPQVDAEYARIEAQLGRARLDALYAAIDESIHVMETRTPMGRFTGDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hpcR AAO17176.1 HpcR Not tested tcd island Protein 1e-19 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rpic_1953 YP_001899520.1 MarR family transcriptional regulator BAC0505 Protein 3e-22 41