Gene Information

Name : Rpic_0239 (Rpic_0239)
Accession : YP_001897833.1
Strain :
Genome accession: NC_010682
Putative virulence/resistance : Unknown
Product : 5-carboxymethyl-2-hydroxymuconate delta-isomerase
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG0179
EC number : 5.3.3.10
Position : 254508 - 255209 bp
Length : 702 bp
Strand : +
Note : PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: rso:RSc0383 hypothetical protein

DNA sequence :
ATGACCGATTTCGTCGTCACCCCGCCCGCCGTCAATGGCATTCCCGTGCGTGGCGGGCATGGCCAGTTTCCGGTGCGCCG
TGTGTACTGCGTCGGCCGCAACTACGCCGCCCATGCGCGCGAGATGGGTTCCGACCCCGACCGCGAACCGCCGTTCTTCT
TCTGCAAGCCGGCCGACGCTGTGCGCTACGTTGCCGACGGCGAGACCGGCCAGTTCGTCTACCCGACTGAAACCAAGGAT
TGCCACTACGAGATCGAACTCGTGGTTGCCATCGGCACGGGCGGGCGCGACATCGCCGTGGAAACGGCAGCCCACCATGT
CTACGGTTACGCCATCGGCCTGGACATGACGCGCCGCGACCTGCAGAACGCTGCCAAGAAGGGCGGCCGCCCGTGGGAGA
CCGGCAAGGCGTTCGACGGCTCGGCCCCCATCGGCCCGATCGTGCCGGCCAAGGATGTGGCCCACCCGGACAAGGGCGCC
GTGACGCTGTCGGTCAACGGCCGCGAACACCAGCGCGGTGATCTGTCGGACCTGATCTGGTCGGTGCCGGAAACCATTGC
GTATCTGTCGCGCCTGTTCGAGCTGCGCCCGGGCGATCTGATCTACACCGGCACGCCCGAAGGCGTCGGCCCGGTCGTCG
TCGGCGACCTGATGGTCGGCAAGATCGACGGCGTGGGAGAGCTGCACGTGAAGGTGATTTGA

Protein sequence :
MTDFVVTPPAVNGIPVRGGHGQFPVRRVYCVGRNYAAHAREMGSDPDREPPFFFCKPADAVRYVADGETGQFVYPTETKD
CHYEIELVVAIGTGGRDIAVETAAHHVYGYAIGLDMTRRDLQNAAKKGGRPWETGKAFDGSAPIGPIVPAKDVAHPDKGA
VTLSVNGREHQRGDLSDLIWSVPETIAYLSRLFELRPGDLIYTGTPEGVGPVVVGDLMVGKIDGVGELHVKVI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAI43829.1 putative isomerase Not tested LEE Protein 2e-61 63