|
Name : Rpic_2902 (Rpic_2902) Accession : YP_001900457.1 Strain : Genome accession: NC_010682 Putative virulence/resistance : Unknown Product : D-lactate dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG0277 EC number : 1.1.2.4 Position : 3016416 - 3017909 bp Length : 1494 bp Strand : + Note : PFAM: FAD linked oxidase domain protein; KEGG: rso:RSc2666 probable glycolate oxidase (FAD-linked subunit) oxidoreductase protein DNA sequence : ATGAACGCATCGCTGTCCGCCACCGCTCGCGATCCGTCTGCCCTGCAGGCTGAGCTGACCGCCGCGCTGTCCCAGATCGT GTCCGACGACGCGCTGCTCTGGGAGCGCGAAGACACCACCCCGTATGAATGCGACGGCTTGGCCGCTTACCGGCAGGTGC CGCTGGCCGTCGTGCTGCCGGATACCGAGGCGCAGGTCGTCGAAATCCTGCGCGTGTGCCACCGCATGGGCGTGCCCGTG GTGCCGCGCGGCGCGGGGACGAGCCTGTCGGGCGGTGCGATGCCGACGCCGGGCGGGCTGGTGCTGTCGCTGGCCAAGTT CAAGCGCATCATCAAGGTGGACCCATACACGCGTACGGCGGTGGTCCAGCCGGGCGTACGCAACCTCGCCATTTCGGAAG CCGCCAACCCGCACGGGTTGTATTACGCGCCCGATCCGTCATCCCAGATTGCCTGCACCATCGGCGGCAACGTGAACGAG AACTCCGGCGGCGTGCATTGCCTGAAGTACGGCCTGACCGTGCACAACGTGCTGCGCGTGCGCGCCGTGATGATGGACGG CGAGGTGGTTGAATTCGGCAGCGAGGCGCCCGACGCCCCCGGCCTGGACCTGCTGGCCACGGTGATCGGCTCCGAAGGCA TGCTGGCCGTGGTGACGGAAGTGACCGTGCGCCTGATCCCCAAGCCGCAACTCGCGCAGGTGATCATGGCGAGCTTCGAC GACGTGGAATCCGGCGGCAACGCCGTGGCCGACGTGATTGCCGCGGGCATCATCCCGGCGGGGCTGGAAATGATGGACAA GCCCGCCACCGCTGCCGTTGAGGAATTCGTCTGCGCCGGCTACGACCTCGACGCGGCCGCCATCCTGCTGTGCGAATCCG ACGGCACGCCCGAAGAAGTGGCCGAAGAGATCGCGCGCATGAGCGAAGTGCTGCGCGCCTCCGGTGCCACGCGCATCCAG GTCTCGCAAAGCGAAGCCGAGCGCCTGAAGTTCTGGAGCGGTCGCAAGAATGCCTTCCCGGCAGCCGGGCGCATTTCGCC GGACTACTACTGCATGGACGGCACCATCCCGCGCAAGCACATTGGCACGCTGCTGCGGCGCATCCAGCAGATGGAGCAGA AGTACGCCCTGCGCTGCATCAACGTGTTCCACGCGGGCGACGGCAACATGCACCCGCTCATCCTCTTCAACGGCGAAGAC CAGGACGAATGGCACCGCGCCGAACTGTTCGGCTCCGACATCCTCGAGACCTGCGTGGAACTCGGCGGCACCGTAACGGG CGAGCACGGCGTGGGCGTGGAAAAGCTCAGTTCGATGTGCGTGCAGTTCTCGGCAGAAGAACGTGACGCATTTCTGCGCG TAAAGGCCGCGTTTGACCCGGTGCGTTTGCTGAACCCCGACAAGGCCATCCCCACGCTCGCGCGCTGCGCCGAATACGGC AAGCTGCACGTGCGCAACGGCCTGCTGCCCCACCCCGACTTGCCGCGTTTCTGA Protein sequence : MNASLSATARDPSALQAELTAALSQIVSDDALLWEREDTTPYECDGLAAYRQVPLAVVLPDTEAQVVEILRVCHRMGVPV VPRGAGTSLSGGAMPTPGGLVLSLAKFKRIIKVDPYTRTAVVQPGVRNLAISEAANPHGLYYAPDPSSQIACTIGGNVNE NSGGVHCLKYGLTVHNVLRVRAVMMDGEVVEFGSEAPDAPGLDLLATVIGSEGMLAVVTEVTVRLIPKPQLAQVIMASFD DVESGGNAVADVIAAGIIPAGLEMMDKPATAAVEEFVCAGYDLDAAAILLCESDGTPEEVAEEIARMSEVLRASGATRIQ VSQSEAERLKFWSGRKNAFPAAGRISPDYYCMDGTIPRKHIGTLLRRIQQMEQKYALRCINVFHAGDGNMHPLILFNGED QDEWHRAELFGSDILETCVELGGTVTGEHGVGVEKLSSMCVQFSAEERDAFLRVKAAFDPVRLLNPDKAIPTLARCAEYG KLHVRNGLLPHPDLPRF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcD | CAE85245.1 | GlcD protein | Not tested | PAI V 536 | Protein | 2e-139 | 58 |
