|
Name : Rpic_0294 (Rpic_0294) Accession : YP_001897885.1 Strain : Genome accession: NC_010682 Putative virulence/resistance : Virulence Product : integral membrane sensor signal transduction histidine kinase Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG2205 EC number : - Position : 311890 - 313386 bp Length : 1497 bp Strand : - Note : PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: pol:Bpro_0544 periplasmic sensor signal transduction histidine kinase DNA sequence : ATGAGTGGACGAGGGGAGGCAGTGCTATCTCGACGGCTCTCGCTGGTATTCGCTGTGCTGTTGCTGGTGTGCTGCGGCAC TTCGGCTTGGCTGCAATTGCGCTCGAACGGACGTCACGAGCAGGAGGTGATCCAACGCTTGTCGAGCGGGTTGGCCGCAC ACATCGCGGAGAATGCCGAACTGATGCGACCGGAAGGACTAAACCCTGTCGCGGTGAAAGATCTGTTCGACAAACTGATG GCGGTGAATCCTAGCGTAGAGGTCTACCTGCTCTCGCCTGACGGCCACATTGCGGCGCAAGCGGCGCCCCCCGGCCACCT CAAGCGCGACCGCGTCGACCTCGCACCGGTGCGCAGACTGCTCGCTGGTGCGACGATGCCGGTCCTCGGTGACGATCCAC GCAACTTGCAAACGCCCAAAGTTTTTAGCGCCGCGCCGATGCGCGTTGATGGCCGAGACGCAGGTTACGTCTACGTGGTG CTGCAGGGCGAGGACCACGACGCCGTTGCCGCGCACGTGGCGGCTGACAACGTTTTGCGGACAACGCTGTGGTCCATGGG GCTGGTGGCTCTTCTCGGGCTTGTAGCGGGCACGGTGGCGTTCTGGCTCATCACGCGGCCTCTGCGCGAGCTGACGGCTG TAGTCCGACGCTTCGAATCCGAAGGAATCGGATCGCTCGAAAGCCAAACGGCGACGCTGGAGCGCATTGCGCGCGGTGGC GGAGAAATAGCGACACTGAGCCAGGCCTTCGTGCAGATGACGCGGCGCATTGCTGAGCAGTGGCGAGAGCTGACGCTGCA GGACCAGCAGCGCCGCGAACTCGTCGCCAATATCTCGCATGACCTGCGCACGCCCCTGACTTCACTACACGGCTACCTGG AAACGCTCCGACTGAAGGCCGGTATCCTCGACGACGAAGAGCGCCGCCGCTACCTCGACATTGCGCTCGGTCAGAGCCGC AAGGTTGGCCGGCTCGCACAGGAGCTATTTGAGCTAGCACGGCTTGAGTACGGCGTGGTTAAGCCAGAAAAGGAAAATTT CGCGTTGGCCGACCTGGTACAAGACGTGTTTCAGAAGTTCGAGTTGGCAGCAGGGGCGCGTCAGCAACAACTCAAGCCAG ACATTGCGCCCGGTCTGCCCATCGTGTCGGCCGACTTGGGCATGATCGAGCGCGTGTTAACAAACCTGCTCGACAACGCC ATCCACCATACGCCAGTAGGCGGCGCGATCGAGGTGCAGTTGCGTCCAACGAATACTGGGGTCGCGGTCCAGGTTAGCGA CACCGGGCCGGGTATCCCAGGTGAACTTCAGAAGGGACTCTTCGTGCGTCCAGTGTTCATGAGCGGTGCCCGCAGCGATG GCTCACGCAGCGGTGGGCTCGGGCTGATGATCGTGCAGCGAATCCTGCAGCTGCATGGCAGCGAAATCCGGCTGGTGCCG CAGCCCGGAAAGGGTGCGGTGTTTTGCTTCCAGTTGGCGGGTGCCGCCAGTGGGTGA Protein sequence : MSGRGEAVLSRRLSLVFAVLLLVCCGTSAWLQLRSNGRHEQEVIQRLSSGLAAHIAENAELMRPEGLNPVAVKDLFDKLM AVNPSVEVYLLSPDGHIAAQAAPPGHLKRDRVDLAPVRRLLAGATMPVLGDDPRNLQTPKVFSAAPMRVDGRDAGYVYVV LQGEDHDAVAAHVAADNVLRTTLWSMGLVALLGLVAGTVAFWLITRPLRELTAVVRRFESEGIGSLESQTATLERIARGG GEIATLSQAFVQMTRRIAEQWRELTLQDQQRRELVANISHDLRTPLTSLHGYLETLRLKAGILDDEERRRYLDIALGQSR KVGRLAQELFELARLEYGVVKPEKENFALADLVQDVFQKFELAAGARQQQLKPDIAPGLPIVSADLGMIERVLTNLLDNA IHHTPVGGAIEVQLRPTNTGVAVQVSDTGPGIPGELQKGLFVRPVFMSGARSDGSRSGGLGLMIVQRILQLHGSEIRLVP QPGKGAVFCFQLAGAASG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| c3564 | NP_755439.1 | hypothetical protein | Not tested | PAI I CFT073 | Protein | 2e-88 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Rpic_0294 | YP_001897885.1 | integral membrane sensor signal transduction histidine kinase | VFG1701 | Protein | 7e-89 | 44 |
