|
Name : secF (xccb100_1797) Accession : YP_001903203.1 Strain : Xanthomonas campestris B100 Genome accession: NC_010688 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecF Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0341 EC number : - Position : 2090170 - 2091138 bp Length : 969 bp Strand : + Note : forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins f DNA sequence : ATGAAACTGTTCCCGCTTCATCTCATTCCCAACGACACCAAGATCGACTTCATGCGCCTGCGCAAGCCGGTGCTGATCCT GATGCTGGTGATCGCGGTCGCCTCGGTCGGCGTCATCGTCGGCAAGGGCTTCAATTACGCACTGGAATTCACCGGCGGCA CGCTGGTGCAGACCTCCTTCCAGAAGACCGTGGACGTGGACCAGGTGCGCGAGCAGCTGTCCAAGGCCGGCTTTGAAAAC GCCCAGGTGCAGAACGCACGCGGCGGCAACGAGGTGATGATTCGCCTGCAGGCGCGCGAGCAGCACAACAACCGCGACGA TGCCGCCACCACCGTCGCTGAAGAAGTGCGCAAGGCCGTCAGCACCGAGCAAAATCCTGCCACCGTGCAGCCGGGCGAAT TCGTCGGCCCGCAGGTCGGCAAGGATCTGGCCTTGAACGGCGTGTACGCCACGGTGTTCATGCTGGTGGGCTTTCTGATC TACATCGCGTTCCGCTTCGAGTGGAAGTTCGCTGTGGTCGCCAGCCTGACCGCGTTGTTCGATTTGCTGGTGACGGTGGC CTTCGTGTCGCTGACCGGCCGCGAGTTCGATCTGACCGTGCTGGCGGGCTTGTTGTCGGTGATGGGTTTTGCGATCAACG ACATCATCGTGGTGTTCGACCGCGTGCGCGAAAACTTCCGCGCGCTGCGCGTGGAACCGCTGGAAGTGCTGAACCGCTCG ATCAACCAGACGTTGTCCCGCACGGTGATCACCGCGGTGATGTTCTTCCTGTCTGCATTGGCGTTGTACATCTACGGCGG CGAGTCGATGGAAGGCCTGGCCGAGACGCACATGATCGGCGCGGTGATCGTGGTGATCTCCTCGATCATCGTCGCCGTGC CGATGCTGAGCATCGGGCCGTTCGCTGTGACCAAGCAGGATCTGCTGCCCAAGGCCAAGGACGTGGAGGCGCTGGCGCGT CGTCCTTAA Protein sequence : MKLFPLHLIPNDTKIDFMRLRKPVLILMLVIAVASVGVIVGKGFNYALEFTGGTLVQTSFQKTVDVDQVREQLSKAGFEN AQVQNARGGNEVMIRLQAREQHNNRDDAATTVAEEVRKAVSTEQNPATVQPGEFVGPQVGKDLALNGVYATVFMLVGFLI YIAFRFEWKFAVVASLTALFDLLVTVAFVSLTGREFDLTVLAGLLSVMGFAINDIIVVFDRVRENFRALRVEPLEVLNRS INQTLSRTVITAVMFFLSALALYIYGGESMEGLAETHMIGAVIVVISSIIVAVPMLSIGPFAVTKQDLLPKAKDVEALAR RP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secF | AAT96102.1 | SecF | Not tested | T-PAI | Protein | 6e-44 | 41 |
| secF | AAT96066.1 | SecF | Not tested | T-PAI | Protein | 2e-44 | 41 |
