Gene Information

Name : xccb100_3575 (xccb100_3575)
Accession : YP_001904980.1
Strain : Xanthomonas campestris B100
Genome accession: NC_010688
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : -
Position : 4044120 - 4044722 bp
Length : 603 bp
Strand : +
Note : -

DNA sequence :
TTGACGGTCAGTGAAGGCGACAGTATCGCCATCGTCGGCGCGTCCGGCTCGGGCAAGACCACCCTGCTCGGCCTGCTCGC
CGGGCTGGACCTGCCCAGCCGCGGCAGCATCGCGCTGGCCGGGCAGGACCTGGGCCAGCTCGACGAGGAAGCACGCGCGG
CCCTGCGCGCGCGCGCGGTGGGCTTCGTGTTCCAGAGCTTCCACCTGCTGCCAGCGCTGACGGCCGAAGAAAACATCGCA
CTGCCGTTGGAACTGGCCGGGCGCGAGGATCCGGCGCGGGTGCGCGAGGTGCTGCAGGCGGTTGGCCTGAGCGCGCGTGC
GCGGCATTACCCACGCCAGCTCTCCGGCGGCGAGCAGCAACGCGTCGCACTGGCGCGCGCCTTCGTGGCCAAGCCGCGCA
TTCTGTTTGCCGATGAGCCCACCGGCAGCCTGGACCAGGCCACCGGCGCGCAGATCAGCGACCTGCTGTTCGCGCTCAAT
GCCACCAGCGAGACCACGCTGGTACTGGTCACCCACGACATGACCCTGGCGCAGCGCTGCCGTCACATCTACCGCATCGA
TGGCGGGCGCCTGCACGCGCAGCAGCCCGGCGCGGCGGCATGA

Protein sequence :
MTVSEGDSIAIVGASGSGKTTLLGLLAGLDLPSRGSIALAGQDLGQLDEEARAALRARAVGFVFQSFHLLPALTAEENIA
LPLELAGREDPARVREVLQAVGLSARARHYPRQLSGGEQQRVALARAFVAKPRILFADEPTGSLDQATGAQISDLLFALN
ATSETTLVLVTHDMTLAQRCRHIYRIDGGRLHAQQPGAAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-26 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
xccb100_3575 YP_001904980.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 9e-29 50
xccb100_3575 YP_001904980.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 8e-25 47