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Name : secD (ETA_25370) Accession : YP_001908459.1 Strain : Erwinia tasmaniensis Et1/99 Genome accession: NC_010694 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 2839252 - 2841099 bp Length : 1848 bp Strand : - Note : part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of DNA sequence : GTGTTAAATCGTTATCCTTTATGGAAGTACATCATGCTGATCGTCGTGTTACTCGTCGGTCTGCTGTATGCACTCCCTAA CCTTTATGGTGAGGATCCGGCTGTTCAGATCACTGGTGCGCGCGGAAGCGCCGCCAGTGAGCAAACGCTGGTCCAGATCC AAAGCGCTTTAAAACAAGACAATATTCCAAGTAAATCCGTTGCTCTGGAAAATGGCGCTATTCTGGCGCGTTTCGCTAAC ACCGACGTGCAGCTGCGCGCGCGTGAGGCGATAATAAAAGTTCTCGGCGAAGATTATGTGGTGGCGCTTAACCTCGCTCC TGCAACGCCAGCCTGGTTAGCAATGTTGTCCGCAGAGCCGATGAAACTCGGTCTCGATCTGCGTGGTGGTGTCCACTTCC TGATGGAAGTTGATATGGATACCGCGCTGGGCAAGCTTCAGGATCAGAACATCGACAATCTACGTAGCGACCTGCGCGAG AAAAGTATTCCCTACATTAACGTGCGTAAAACCGCTAATTATGGTCTGGAAATTCGCTTCCGTGACGATAAAGCGCGTGA TGCCGCCATTAGTTATCTGACCACTCGTCACCGCGATATGGTGATCAACAGCAGCGGCAGTAATGCCCTGACGGCGGTAA TGAGCGACGAGCGCATGCGTGAAGCGCGTGAATATGCCGTTCAGCAGAACATCAATATTCTGCGCAACCGTGTTAATCAG CTGGGCGTGGCGGAACCTCTGGTGCAGCGCCAGGGATCGGATCGTATCGTAGTTGAACTGCCGGGTATTCAGGATACGGC GCGCGCCAAAGAGATCCTGGGAGCAACGGCAACGCTGGAGTTCCGACTGGTCAATACCAGCGTGGACGCAACATCAGCCG CAAACGGCCGTATACCGGGCGATTCGGAAGTAAAAGATACGCGCGAAGGGCAGCCGGTTGTGCTGTACAAGCGGGTGATC CTTACCGGTGACCACATTACCGACTCCACATCCAGCACCGATGAATACAATCAGCCACAGGTGAATATTTCTCTGGACAG CGCTGGCGGCAATATCATGTCCAACTTTACCAAAGACAGCGTAGGTAAAGCGATGGCGACCCTGTTTGTTGAATACAAAG ACAGTGGTAAGAAAGACGCCAATGGCCGTGCGATTCTGGAAAAGCATGAAGAGGTGATTAACGTTGCCAATATCCAGTCA CGACTGGGTAACAGCTTCCGTATTACCGGTATCAATAACCCGAACGAAGCTCGTCAGCTTTCGCTGCTGCTGCGTGCCGG TGCGTTGATTGCGCCAATTCAGATTGTGGAAGAGCGTACCATTGGTCCAACGATGGGTGCGCAGAACATCACCCAGGGGC TGGAAGCCTGCCTGTGGGGGCTGATTGCTTCTATCGTCTTTATGGTGGTGTGGTACAAGAAATTCGGCCTGGTAGCCACC AGCGCACTGCTGGCTAACCTGGTGCTGATCGTCGGCATTATGTCGCTGCTTCCTGGCGCTACGCTAACAATGCCGGGTAT TGCCGGTATTGTGTTAACGCTGGCGGTAGCAGTCGATGCTAACGTACTGATTAACGAGCGTATCAAGGAGGAGCTGCGTA ACGGACGTTCCGTACAGCAGGCGATCCATGAGGGTTATAAAGGCGCGTTTTCCAGTATCGTGGATGCCAACGTGACCACG CTGATTAAAGTTATCATTCTGTACGCAGTGGGTACCGGCTCGATTAAAGGGTTTGCTATCACAACTGCGATTGGTGTGGC AACTTCCATGTTTACCGCGATTATCGGCACCCGTGCCATCGTCAATCTGATGTATGGCGGCAAACGCATTAACAAGTTGT CTATCTGA Protein sequence : MLNRYPLWKYIMLIVVLLVGLLYALPNLYGEDPAVQITGARGSAASEQTLVQIQSALKQDNIPSKSVALENGAILARFAN TDVQLRAREAIIKVLGEDYVVALNLAPATPAWLAMLSAEPMKLGLDLRGGVHFLMEVDMDTALGKLQDQNIDNLRSDLRE KSIPYINVRKTANYGLEIRFRDDKARDAAISYLTTRHRDMVINSSGSNALTAVMSDERMREAREYAVQQNINILRNRVNQ LGVAEPLVQRQGSDRIVVELPGIQDTARAKEILGATATLEFRLVNTSVDATSAANGRIPGDSEVKDTREGQPVVLYKRVI LTGDHITDSTSSTDEYNQPQVNISLDSAGGNIMSNFTKDSVGKAMATLFVEYKDSGKKDANGRAILEKHEEVINVANIQS RLGNSFRITGINNPNEARQLSLLLRAGALIAPIQIVEERTIGPTMGAQNITQGLEACLWGLIASIVFMVVWYKKFGLVAT SALLANLVLIVGIMSLLPGATLTMPGIAGIVLTLAVAVDANVLINERIKEELRNGRSVQQAIHEGYKGAFSSIVDANVTT LIKVIILYAVGTGSIKGFAITTAIGVATSMFTAIIGTRAIVNLMYGGKRINKLSI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 2e-119 | 48 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 3e-119 | 47 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 3e-119 | 47 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 3e-119 | 47 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 5e-119 | 47 |
