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Name : hrpL (ETA_05230) Accession : YP_001906471.1 Strain : Erwinia tasmaniensis Et1/99 Genome accession: NC_010694 Putative virulence/resistance : Virulence Product : Sigma factor HrpL (hrp cluster) Function : - COG functional category : K : Transcription COG ID : COG1595 EC number : - Position : 588099 - 588647 bp Length : 549 bp Strand : + Note : silverDB:etchr00523 DNA sequence : ATGACAGAAGTTCACCTGCTGAAGACAGAAAAACCATCGATCGGCGATGCGCTGCCGCTCAATATCGACTGGGAGGGGAT TTTTCGTGAGCACGGGCGACGCGTGCATCACTTTATTCGTAAACGTGTTTCTCACCGTGAAGATGCAGAGGATCTGGAAC AAATGACCTGGCTGGAAGTGTTACGCAATCGCGATAAGTTTGCCGGTGCGTCACGGCCAGAAACCTGGGTATTCGGTATC GCCCTGAATCTGGTACGTAATCATTTTCGCCTCCAGTCCGGCCGCCCGCGCTGTGATGAACTGGAAGACGATATTGTGGT AGTCCAGGGCGACGATCCCAGCCATATCACCGAACATCAGCGCATATTGACCTCGACGCTCAACTCCATCGCCGCGTTGC CGGAAGATACGCGCCGTCTGATGAGTATGCTGGTCGAGAAAGACGGCAGTTATCAGGCCATCGCGGCGCATTTAAATATT CCGATTGGTACGGTGCGCTCCCGTTTGTCGCGCGCGCGCGTCTCGCTGAAGCAGTCAGTATTTTCTTAA Protein sequence : MTEVHLLKTEKPSIGDALPLNIDWEGIFREHGRRVHHFIRKRVSHREDAEDLEQMTWLEVLRNRDKFAGASRPETWVFGI ALNLVRNHFRLQSGRPRCDELEDDIVVVQGDDPSHITEHQRILTSTLNSIAALPEDTRRLMSMLVEKDGSYQAIAAHLNI PIGTVRSRLSRARVSLKQSVFS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrpL | AAD24681.1 | sigma factor HrpL | Virulence | Hrp PAI | Protein | 3e-70 | 91 |
| hrpL | ABA47271.1 | HrpL | Virulence | S-PAI | Protein | 3e-28 | 49 |
| hrpL | AAT96335.1 | HrpL | Virulence | S-PAI | Protein | 3e-26 | 49 |
| hrpL | AAT96254.1 | HrpL | Virulence | S-PAI | Protein | 2e-26 | 49 |
| hrpL | AAT96295.1 | HrpL | Virulence | S-PAI | Protein | 2e-26 | 49 |
| hrpL | AAG33875.2 | HrpL | Virulence | Hrp PAI | Protein | 1e-18 | 41 |
| hrpL | NP_791231.1 | RNA polymerase sigma factor HrpL | Virulence | Hrp PAI | Protein | 2e-18 | 41 |
