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Name : HPSH_01105 (HPSH_01105) Accession : YP_001909705.1 Strain : Helicobacter pylori Shi470 Genome accession: NC_010698 Putative virulence/resistance : Unknown Product : sodium-dependent transporter Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG0471 EC number : - Position : 207173 - 208831 bp Length : 1659 bp Strand : + Note : COG0471 Di- and tricarboxylate transporters DNA sequence : ATGGAAAATCATTCGCATGCCAATACGCATACAGATACGCGCGCCGATGATAAAAGCACTAAGATCGTGCGCTTGTTGGG GTTAATAGGAGGGGTGTTAATCGCGCTTATTATCTATTACGCTTTAAACGCTCAACTGCCTCATATTGTAGAAGAAATCC CCAAGCTCAATTCTTTAAATTATAAGGCGATGCCTGTTGTGGCTGGGGTGGCTGTTTTAATGGGGATATGGTGGATGACT GAAGCCATTGACCTGCCCGCAACCGCGCTTTTACCTTTAGTGCTTTTTAGCGTCTTTAGCGTGGATCAATTCGCTAGCGT TAGCTCTTCTTACGCATCGCCGATTATCTTTCTTTTTATGGGAGGGTTTATTTTAGCTTTAAGCATGCAAAAATGGAATT TGCACACACGCATCGCTTTAAGCATTATTTTATTAGTAGGCACAAGCCCTAGGAGGTTGATTTTAGGTTTCATGATAGCT ACAGGCTTTCTGTCTATGTGGGTGAGCAATACCGCAACGGCGGTGATGATGCTCCCTATTGGCATGAGCGTTTTGCAATT AGTCGCTAAACTTGTGGGCAAAGAAAACGCCTCTAATTCATGGCATCAAAAAGAAGAAATCACCAAAGCGCATGGGGGTA TTATGGGCAATATCGTGCATAAGGGCAAAGATATTTCTCAAGTCATTCAAGAAAAGACCATCATTTATCGCACGAATTTC AGTATTTGCTTGATGCTTGGTATCGCTTATGCGGCTTCTATTGGTTCTTTAGGCACTCTTATTGGCACGCCGCCTAACGC TTTATTAGCCGGCTATATGAAAACCGCTTTCAATATTGAAATTGATTTCGCTCAGTGGATGGTGTTTGGGACGCCGTTAG CCTTCATCATGCTCATTTTATCGTGGCTCTTGCTCACTTATGTGATTTTCCCTTTAAAGATTAAAGAAATCCCAGGGGGT AAGGAAGTCATTAAGGTAGAGTTAAAAAAATTAGGCCGCTTGAGTTGGGCGGAAATCTCTGTGGGCGTTATTTTTATTTT GGCGTCTTTAGGGTGGATTTTTTTAGATACGATTTTAAAATCTTGGGGCATTAAGATAGATAAAATTGATTCAGTGATTG CGATGGGGGTTTCTGCGCTTTTATTCATTTTGCCCGCTAACCATCATGGCGATAGGCTCATTGATTGGGGTGTTGCTAAA AAACTCCCTTGGGATGTGTTGCTTTTATTTGGCGGCGGGTTAGCCTTGAGCGCGCAATTTTCTAAAACCGGGTTGAGTTT GTGGATCGGGCATTTAGTTTCTGGCTTTTCGCATTTACCGATTTTATTCATTATTTTCATGGTCACTTTAATGGTCATTT TCTTAACCGAAATCACTTCTAACACCGCCACCGCTGCGGCGTTTTTACCGGTGATTGGAGGGGTTGCGATGGGCATGGGT TATGAAAATCATCAAAGCTTGTTATTGACCATTCCTGTAGCCTTGAGCGCGACTTGCGCGTTCATGCTCCCTGTAGCCAC CCCACCCAATGCGATAGCTTATGGCTCTGGGTATGTTAAAATAACGGATATGATTAAAGCCGGTTTGTGGCTTAATTTAG TGGGAGTTGTTTTGATTAGCGCGTTTAGCTATTTTTTAGTTTCGCTGGTATTTAATTGA Protein sequence : MENHSHANTHTDTRADDKSTKIVRLLGLIGGVLIALIIYYALNAQLPHIVEEIPKLNSLNYKAMPVVAGVAVLMGIWWMT EAIDLPATALLPLVLFSVFSVDQFASVSSSYASPIIFLFMGGFILALSMQKWNLHTRIALSIILLVGTSPRRLILGFMIA TGFLSMWVSNTATAVMMLPIGMSVLQLVAKLVGKENASNSWHQKEEITKAHGGIMGNIVHKGKDISQVIQEKTIIYRTNF SICLMLGIAYAASIGSLGTLIGTPPNALLAGYMKTAFNIEIDFAQWMVFGTPLAFIMLILSWLLLTYVIFPLKIKEIPGG KEVIKVELKKLGRLSWAEISVGVIFILASLGWIFLDTILKSWGIKIDKIDSVIAMGVSALLFILPANHHGDRLIDWGVAK KLPWDVLLLFGGGLALSAQFSKTGLSLWIGHLVSGFSHLPILFIIFMVTLMVIFLTEITSNTATAAAFLPVIGGVAMGMG YENHQSLLLTIPVALSATCAFMLPVATPPNAIAYGSGYVKITDMIKAGLWLNLVGVVLISAFSYFLVSLVFN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| DIP0179 | NP_938571.1 | hypothetical protein | Not tested | Not named | Protein | 2e-104 | 53 |
